C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | microtubule-associated protein 1 light chain 3 beta | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSMUSG00000031812  |
Map1lc3b | 10090 | + |
8:121590361-121598760  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENSMUST00000034270 |
Map1lc3b-001 | 121590361-121598760 | protein_coding | ||
| ENSMUST00000180548 |
Map1lc3b-002 | 121590481-121598046 | retained_intron | ||
| ENSMUST00000181521 |
Map1lc3b-005 | 121590712-121596995 | protein_coding | ||
| ENSMUST00000181826 |
Map1lc3b-004 | 121590477-121593109 | retained_intron | ||
| ENSMUST00000181948 |
Map1lc3b-003 | 121590484-121597012 | protein_coding | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008VY | CIL_0008VY_0002 | VISTA | 8:121000361-121603557 |
| CIL_0008WG | CIL_0008WG_0002 | VISTA | 8:121365198-121966118 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005776 | IDA | autophagic vacuole |
| GO:0005874 | IEA | microtubule |
| GO:0005930 | IDA | axoneme |
| GO:0006914 | IEA | autophagy |
| GO:0016020 | IDA | membrane |
| GO:0031410 | IEA | cytoplasmic vesicle |
| GO:0070257 | IMP | positive regulation of mucus secretion |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000020048
|
map1lc3b | microtubule-associated protein 1 light chain 3 beta | protein_coding | Danio_rerio | |
|
ENSG00000171471
|
MAP1LC3B2 | microtubule-associated protein 1 light chain 3 beta 2 | protein_coding | Homo_sapiens | |
