C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microtubule-associated protein 1 light chain 3 beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031812 Map1lc3b 10090 + 8:121590361-121598760 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034270 Map1lc3b-001 121590361-121598760 protein_coding
  ENSMUST00000180548 Map1lc3b-002 121590481-121598046 retained_intron
  ENSMUST00000181521 Map1lc3b-005 121590712-121596995 protein_coding
  ENSMUST00000181826 Map1lc3b-004 121590477-121593109 retained_intron
  ENSMUST00000181948 Map1lc3b-003 121590484-121597012 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VY CIL_0008VY_0002 VISTA 8:121000361-121603557
CIL_0008WG CIL_0008WG_0002 VISTA 8:121365198-121966118

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005776 IDA autophagic vacuole
GO:0005874 IEA microtubule
GO:0005930 IDA axoneme
GO:0006914 IEA autophagy
GO:0016020 IDA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0070257 IMP positive regulation of mucus secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020048 map1lc3b microtubule-associated protein 1 light chain 3 beta protein_coding Danio_rerio
ENSG00000171471 MAP1LC3B2 microtubule-associated protein 1 light chain 3 beta 2 protein_coding Homo_sapiens

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