C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: schlafen family member 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172123 SLFN12 9606 - 17:35411060-35433283 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304905 SLFN12-001 35411069-35432524 protein_coding
  ENST00000394562 SLFN12-002 35411060-35433196 protein_coding
  ENST00000428476 SLFN12-008 35431883-35433165 processed_transcript
  ENST00000445092 SLFN12-005 35422821-35433145 protein_coding
  ENST00000447040 SLFN12-003 35422683-35433199 protein_coding
  ENST00000452764 SLFN12-004 35411071-35433283 protein_coding
  ENST00000460530 SLFN12-006 35411317-35420765 processed_transcript
  ENST00000479326 SLFN12-007 35411368-35420835 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304905ENST00000394562ENST00000445092ENST00000447040ENST00000452764ENST00000460530ENST00000479326
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304905 0.301±0.00 0.504±0.00 0.600±0.00 0.147±0.00 N/A 0.287±0.04 N/A 0.087±0.00 1.563±1.07 N/A 0.640±0.06 0.157±0.01 N/A
ENST00000394562 0.441±0.00 0.423±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00
ENST00000445092 N/A N/A N/A N/A N/A 0.396±0.00 N/A N/A N/A N/A N/A N/A 0.145±0.00
ENST00000447040 N/A N/A N/A 0.072±0.00 N/A N/A 0.293±0.00 N/A N/A N/A 0.864±0.00 1.218±0.00 0.137±0.00
ENST00000452764 N/A N/A N/A N/A 0.992±0.27 0.247±0.00 0.314±0.00 N/A N/A 0.058±0.00 0.500±0.00 0.161±0.00 N/A
ENST00000460530 N/A N/A N/A 0.093±0.01 N/A N/A N/A N/A N/A 0.262±0.00 0.374±0.00 0.476±0.02 0.251±0.00
ENST00000479326 N/A 0.524±0.00 N/A N/A N/A N/A N/A N/A N/A 0.830±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RF CIL_0003RF_0002 CGP 17:35350305-35433283

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000000204 Slfn4 schlafen 4 protein_coding Mus_musculus
ENSMUSG00000018986 Slfn3 schlafen 3 protein_coding Mus_musculus
ENSMUSG00000072620 Slfn2 schlafen 2 protein_coding Mus_musculus
ENSMUSG00000078763 Slfn1 schlafen 1 protein_coding Mus_musculus

Loading