C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154760-ENSG00000205045 CGP 9606 17:35435096-35537861
GeneTranscriptPositionBiotype
ENSG00000154760 (SLFN13)
schlafen family member 13 		ENST00000285013 (SLFN13-002) 35435096-35448837 protein_coding
ENST00000524511 (SLFN13-009) 35445362-35448369 protein_coding
ENST00000526483 (SLFN13-008) 35446986-35448755 retained_intron
ENST00000526861 (SLFN13-004) 35437543-35448782 protein_coding
ENST00000530782 (SLFN13-001) 35438984-35448837 nonsense_mediated_decay
ENST00000531588 (SLFN13-006) 35445448-35448785 protein_coding
ENST00000532210 (SLFN13-007) 35442100-35448764 protein_coding
ENST00000532774 (SLFN13-010) 35441890-35443954 retained_intron
ENST00000533791 (SLFN13-005) 35439498-35446010 protein_coding
ENST00000534689 (SLFN13-003) 35439480-35448764 protein_coding
ENST00000542635 (SLFN13-201) 35437545-35447394 protein_coding
ENSG00000205045 (SLFN12L)
schlafen family member 12-like 		ENST00000260908 (SLFN12L-004) 35473689-35487857 protein_coding
ENST00000361112 (SLFN12L-005) 35474904-35537861 protein_coding
ENST00000587436 (SLFN12L-008) 35464249-35478469 retained_intron
ENST00000590802 (SLFN12L-007) 35464257-35478226 retained_intron
ENSG00000255987 (TOMM20P2)
translocase of outer mitochondrial membrane 20 homolog (yeast) pseudogene 2 		ENST00000540082 (TOMM20P2-001) 35514766-35515186 processed_pseudogene
ENSG00000267046 (RP11-1094M14.9)
 ENST00000589887 (RP11-1094M14.9-001) 35490009-35491238 processed_pseudogene
ENSG00000267074 (RP11-1094M14.5)
 ENST00000592908 (RP11-1094M14.5-001) 35499690-35510270 sense_intronic
ENSG00000267312 (RP11-1094M14.7)
 ENST00000588022 (RP11-1094M14.7-001) 35459481-35460550 processed_pseudogene
ENSG00000267349 (RP11-686D22.9)
 ENST00000587076 (RP11-686D22.9-001) 35477994-35478444 antisense
ENSG00000267369 (RP11-1094M14.8)
 ENST00000587542 (RP11-1094M14.8-001) 35498218-35499175 processed_pseudogene
ENSG00000267554 (RP11-686D22.10)
 ENST00000592517 (RP11-686D22.10-001) 35470069-35470628 processed_pseudogene
CIL_0003RF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172716-ENSG00000172123 CGP 9606 17:35350305-35433283
GeneTranscriptPositionBiotype
ENSG00000172123 (SLFN12)
schlafen family member 12 		ENST00000304905 (SLFN12-001) 35411069-35432524 protein_coding
ENST00000394562 (SLFN12-002) 35411060-35433196 protein_coding
ENST00000428476 (SLFN12-008) 35431883-35433165 processed_transcript
ENST00000445092 (SLFN12-005) 35422821-35433145 protein_coding
ENST00000447040 (SLFN12-003) 35422683-35433199 protein_coding
ENST00000452764 (SLFN12-004) 35411071-35433283 protein_coding
ENST00000460530 (SLFN12-006) 35411317-35420765 processed_transcript
ENST00000479326 (SLFN12-007) 35411368-35420835 retained_intron
ENSG00000172716 (SLFN11)
schlafen family member 11 		ENST00000308377 (SLFN11-002) 35350305-35373607 protein_coding
ENST00000394566 (SLFN11-001) 35350305-35373620 protein_coding
ENST00000427966 (SLFN11-005) 35363537-35373620 protein_coding
ENST00000430814 (SLFN11-004) 35363536-35373620 protein_coding
ENST00000441608 (SLFN11-003) 35363473-35373695 protein_coding
ENST00000498396 (SLFN11-006) 35367266-35373620 retained_intron
ENST00000586099 (SLFN11-013) 35360019-35362992 retained_intron
ENST00000588579 (SLFN11-011) 35363568-35373620 protein_coding
ENST00000589562 (SLFN11-012) 35363622-35367294 retained_intron
ENST00000589811 (SLFN11-010) 35363507-35373620 protein_coding
ENST00000591682 (SLFN11-009) 35363439-35373622 protein_coding
ENST00000592108 (SLFN11-007) 35351899-35353131 protein_coding
ENST00000592122 (SLFN11-008) 35363662-35373701 protein_coding
ENSG00000267102 (RP11-686D22.7)
 ENST00000590824 (RP11-686D22.7-001) 35409602-35410228 transcribed_processed_pseudogene
ENSG00000267547 (RP11-686D22.4)
 ENST00000592117 (RP11-686D22.4-001) 35403837-35404373 lincRNA
ENSG00000267648 (RP11-686D22.3)
 ENST00000590539 (RP11-686D22.3-001) 35406948-35407818 transcribed_processed_pseudogene
ENSG00000267711 (RP11-686D22.5)
 ENST00000589099 (RP11-686D22.5-001) 35400878-35403006 lincRNA
ENSG00000267745 (RP11-686D22.8)
 ENST00000587012 (RP11-686D22.8-001) 35406684-35409768 processed_transcript
CIL_0003RF_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035208-ENSMUSG00000072620 CGP 10090 11:83002158-83070678
GeneTranscriptPositionBiotype
ENSMUSG00000035208 (Slfn8)
schlafen 8 		ENSMUST00000038141 (Slfn8-001) 83002158-83020810 protein_coding
ENSMUST00000092838 (Slfn8-003) 83002524-83020810 protein_coding
ENSMUST00000108152 (Slfn8-201) 83002158-83020722 protein_coding
ENSMUST00000130822 (Slfn8-002) 83003887-83020108 protein_coding
ENSMUST00000131883 (Slfn8-004) 83004057-83017180 protein_coding
ENSMUSG00000072620 (Slfn2)
schlafen 2 		ENSMUST00000038038 (Slfn2-001) 83065112-83070678 protein_coding
ENSMUSG00000072621 (Slfn10-ps)
schlafen 10, pseudogene 		ENSMUST00000100716 (Slfn10-ps-002) 83028130-83040042 processed_transcript
ENSMUST00000152760 (Slfn10-ps-001) 83028855-83036166 transcribed_unprocessed_pseudogene
ENSMUSG00000082419 (Gm11425)
predicted gene 11425 		ENSMUST00000119608 (Gm11425-001) 83027500-83027997 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RF_0001ENSG00000154760ENST00000285013ENST00000524511ENST00000526483ENST00000530782ENST00000531588ENST00000532774ENST00000533791ENST00000534689ENST00000542635ENSG00000205045ENST00000260908ENST00000361112ENST00000587436ENST00000590802ENSG00000255987ENST00000540082ENSG00000267046ENST00000589887ENSG00000267074ENST00000592908ENSG00000267312ENST00000588022ENSG00000267349ENST00000587076ENSG00000267369ENST00000587542ENSG00000267554ENST00000592517CIL_0003RF_0002ENSG00000172123ENST00000304905ENST00000394562ENST00000445092ENST00000447040ENST00000452764ENST00000460530ENST00000479326ENSG00000172716ENST00000308377ENST00000394566ENST00000589562ENST00000592108ENSG00000267102ENST00000590824ENSG00000267547ENST00000592117ENSG00000267648ENST00000590539ENSG00000267711ENST00000589099ENSG00000267745ENST00000587012CIL_0003RF_0003ENSMUSG00000035208ENSMUST00000038141ENSMUST00000092838ENSMUST00000108152ENSMUST00000130822ENSMUST00000131883ENSMUSG00000072620ENSMUST00000038038ENSMUSG00000072621ENSMUST00000100716ENSMUST00000152760ENSMUSG00000082419ENSMUST00000119608
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154760 ENST00000285013 0.160±0.00 N/A N/A 0.046±0.00 0.398±0.00 0.131±0.00 0.059±0.00 0.079±0.00 0.199±0.00 0.255±0.00 N/A 0.279±0.05 0.036±0.00 0.106±0.00
ENST00000524511 N/A N/A N/A N/A N/A 1.601±0.00 N/A 1.665±0.00 N/A N/A N/A N/A N/A N/A
ENST00000526483 N/A N/A N/A 0.350±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530782 0.419±0.00 1.249±0.00 N/A N/A 0.481±0.00 0.919±0.00 0.160±0.00 0.620±0.00 0.118±0.00 2.573±0.00 N/A 1.063±0.25 0.113±0.02 0.226±0.15
ENST00000531588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.297±0.00
ENST00000532210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A 0.583±0.13 N/A
ENST00000533791 0.289±0.00 0.739±0.00 0.704±0.00 0.034±0.00 1.004±0.77 0.647±0.08 0.155±0.07 0.259±0.00 0.318±0.23 1.605±0.12 N/A 1.235±0.73 0.115±0.01 0.119±0.05
ENST00000534689 N/A N/A N/A 0.042±0.03 N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A
ENST00000542635 N/A N/A 0.178±0.00 N/A N/A 0.523±0.00 N/A 0.120±0.00 N/A 0.539±0.00 N/A N/A 0.031±0.00 N/A
ENSG00000205045 ENST00000260908 0.113±0.00 N/A 0.035±0.00 N/A N/A 0.345±0.26 0.137±0.00 0.111±0.00 0.093±0.00 0.338±0.17 0.028±0.00 0.170±0.09 N/A 0.109±0.01
ENST00000361112 0.056±0.00 N/A N/A 0.059±0.00 N/A 0.187±0.00 0.103±0.01 N/A 0.079±0.00 0.953±0.64 0.013±0.00 0.084±0.03 0.055±0.03 N/A
ENST00000587436 N/A N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A 0.406±0.00 0.091±0.00 0.226±0.00 0.064±0.02 0.314±0.11
ENST00000590802 0.254±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255987 ENST00000540082 0.070±0.00 1.702±0.00 N/A N/A 0.521±0.30 0.098±0.03 0.400±0.00 0.444±0.00 N/A 1.640±1.01 N/A 0.312±0.22 0.184±0.08 0.373±0.01
ENSG00000267046 ENST00000589887 N/A N/A N/A N/A 1.272±0.00 N/A 0.106±0.00 N/A 0.012±0.00 N/A N/A 0.206±0.18 N/A N/A
ENSG00000267074 ENST00000592908 0.176±0.00 1.558±0.00 N/A 0.054±0.00 0.616±0.09 0.507±0.40 0.086±0.00 N/A N/A 1.254±0.18 0.011±0.00 0.159±0.04 0.128±0.03 0.158±0.08
ENSG00000267312 ENST00000588022 N/A 0.486±0.00 N/A 0.062±0.00 0.121±0.03 0.009±0.00 0.009±0.00 N/A 0.134±0.00 0.151±0.00 0.086±0.00 0.051±0.05 0.082±0.00 0.065±0.06
ENSG00000267349 ENST00000587076 N/A N/A N/A N/A N/A 1.187±0.00 0.329±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000267369 ENST00000587542 0.102±0.00 2.855±0.00 N/A 0.073±0.00 0.313±0.00 N/A 0.172±0.08 0.034±0.00 0.706±0.00 0.905±0.00 N/A 0.306±0.06 0.255±0.16 0.608±0.00
ENSG00000267554 ENST00000592517 0.095±0.00 1.438±0.00 N/A N/A 0.595±0.21 0.460±0.44 0.224±0.00 0.363±0.32 0.397±0.31 0.984±0.53 N/A 0.506±0.35 0.228±0.00 0.181±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172123 ENST00000304905 0.301±0.00 0.504±0.00 0.600±0.00 0.147±0.00 N/A N/A 0.287±0.04 N/A 0.087±0.00 1.563±1.07 N/A 0.640±0.06 0.157±0.01 N/A
ENST00000394562 0.441±0.00 0.423±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00
ENST00000428476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445092 N/A N/A N/A N/A N/A N/A 0.396±0.00 N/A N/A N/A N/A N/A N/A 0.145±0.00
ENST00000447040 N/A N/A N/A 0.072±0.00 N/A N/A N/A 0.293±0.00 N/A N/A N/A 0.864±0.00 1.218±0.00 0.137±0.00
ENST00000452764 N/A N/A N/A N/A 0.992±0.27 N/A 0.247±0.00 0.314±0.00 N/A N/A 0.058±0.00 0.500±0.00 0.161±0.00 N/A
ENST00000460530 N/A N/A N/A 0.093±0.01 N/A N/A N/A N/A N/A N/A 0.262±0.00 0.374±0.00 0.476±0.02 0.251±0.00
ENST00000479326 N/A 0.524±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.830±0.00 N/A N/A N/A
ENSG00000172716 ENST00000308377 5.290±0.00 1.975±0.00 N/A 0.386±0.09 4.734±0.54 4.761±0.00 2.398±0.00 1.548±1.38 0.424±0.00 5.947±3.81 1.000±0.00 3.431±2.68 0.664±0.14 2.127±1.67
ENST00000394566 2.409±0.00 3.414±0.00 N/A 0.462±0.00 N/A 1.679±0.00 1.118±0.15 1.141±0.00 3.259±0.00 5.188±0.51 0.807±0.23 3.490±3.32 0.824±0.33 0.508±0.25
ENST00000427966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.168±0.00
ENST00000589811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592108 N/A N/A 0.953±0.00 N/A N/A N/A N/A 1.384±0.00 N/A N/A N/A 1.256±0.00 1.323±0.18 N/A
ENST00000592122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267102 ENST00000590824 0.884±0.00 1.299±0.00 1.732±0.00 0.202±0.04 1.138±0.00 1.323±0.00 0.731±0.17 0.913±0.42 N/A 2.377±0.00 N/A 0.295±0.00 1.038±0.49 0.804±0.35
ENSG00000267547 ENST00000592117 0.499±0.00 1.313±0.00 N/A 1.117±0.00 0.831±0.00 0.580±0.00 0.462±0.00 0.956±0.00 0.253±0.12 0.936±0.00 0.615±0.00 0.914±0.84 0.668±0.50 0.483±0.33
ENSG00000267648 ENST00000590539 N/A 0.374±0.00 N/A 0.220±0.00 0.557±0.00 0.283±0.00 0.593±0.00 0.481±0.15 N/A N/A N/A N/A 0.916±0.00 0.389±0.00
ENSG00000267711 ENST00000589099 N/A 0.037±0.00 N/A N/A 0.294±0.00 0.034±0.00 0.034±0.00 N/A N/A N/A 0.395±0.00 0.165±0.09 0.038±0.00 0.056±0.02
ENSG00000267745 ENST00000587012 0.481±0.00 0.627±0.00 1.074±0.00 0.248±0.13 1.439±0.69 0.329±0.00 0.535±0.06 1.041±0.06 0.731±0.50 0.723±0.00 0.539±0.41 1.142±0.40 0.484±0.29 0.630±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035208 ENSMUST00000038141 0.249±0.21 N/A 0.574±0.06 0.037±0.00 0.493±0.33 0.126±0.05 N/A 0.088±0.03 0.224±0.21 0.088±0.05 0.094±0.02 0.289±0.19 0.152±0.06 0.044±0.00
ENSMUST00000092838 0.181±0.00 N/A N/A N/A 0.464±0.00 N/A N/A N/A 0.159±0.08 N/A N/A 0.172±0.00 0.057±0.00 0.015±0.00
ENSMUST00000108152 N/A N/A 0.239±0.00 0.018±0.00 N/A 0.164±0.00 0.042±0.00 N/A 0.078±0.05 0.072±0.05 0.110±0.02 0.402±0.26 0.197±0.04 0.022±0.01
ENSMUST00000130822 0.062±0.00 N/A N/A N/A N/A 0.135±0.06 0.072±0.00 N/A 0.073±0.00 0.128±0.00 N/A 1.131±0.00 0.072±0.00 N/A
ENSMUST00000131883 N/A 0.694±0.00 N/A N/A 0.715±0.00 N/A 0.154±0.00 N/A N/A N/A N/A 0.324±0.13 N/A 0.194±0.00
ENSMUSG00000072620 ENSMUST00000038038 5.567±1.09 1.883±0.50 6.490±0.33 0.184±0.08 15.382±2.80 2.495±0.26 1.843±0.35 3.372±0.61 4.209±4.78 8.439±0.90 0.966±0.76 3.440±0.81 3.776±2.66 0.106±0.06
ENSMUSG00000072621 ENSMUST00000100716 0.151±0.03 0.158±0.01 0.061±0.00 0.011±0.00 0.443±0.07 N/A 0.037±0.02 0.047±0.02 0.027±0.01 0.067±0.01 0.017±0.01 0.183±0.08 0.121±0.04 0.009±0.00
ENSMUST00000152760 0.058±0.02 0.151±0.04 N/A 0.011±0.00 0.110±0.00 0.039±0.00 N/A 0.040±0.01 0.029±0.02 0.092±0.02 0.026±0.01 0.118±0.05 0.009±0.00 0.015±0.00
ENSMUSG00000082419 ENSMUST00000119608 0.201±0.10 0.155±0.00 0.741±0.36 0.619±0.40 0.385±0.16 0.300±0.00 0.253±0.01 0.204±0.12 0.412±0.48 0.218±0.00 0.105±0.00 0.204±0.10 0.115±0.03 1.527±0.00

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