C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FERM domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172159 FRMD3 9606 - 9:83242990-83538546 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304195 FRMD3-006 83244622-83538438 protein_coding
  ENST00000328788 FRMD3-003 83242990-83267287 protein_coding
  ENST00000376434 FRMD3-002 83242990-83331961 protein_coding
  ENST00000376438 FRMD3-001 83242990-83538546 protein_coding
  ENST00000431299 FRMD3-005 83297532-83311966 protein_coding
  ENST00000465485 FRMD3-004 83247972-83281608 processed_transcript
  ENST00000621208 FRMD3-201 83244626-83467742 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304195ENST00000328788ENST00000376434ENST00000376438ENST00000621208
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304195 5.007±0.00 1.514±0.00 1.230±0.00 1.195±0.24 1.429±0.11 1.165±0.35 3.998±1.34 5.685±0.00 0.866±0.86 0.344±0.00 1.269±0.00 0.247±0.17 3.056±0.72 N/A
ENST00000328788 N/A N/A N/A N/A N/A N/A 21.290±0.00 N/A N/A N/A 2.100±0.00 N/A N/A N/A
ENST00000376434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.093±0.00
ENST00000376438 N/A N/A N/A N/A N/A 1.181±0.00 N/A N/A N/A 1.096±0.00 1.114±0.00 N/A N/A 1.430±0.00
ENST00000621208 N/A N/A N/A N/A N/A N/A 0.700±0.00 0.109±0.00 N/A N/A 0.245±0.00 0.427±0.35 N/A 0.315±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UM CIL_0005UM_0002 CGP 9:82979585-83538546

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008092 IEA cytoskeletal protein binding
GO:0016021 IEA integral component of membrane
GO:0019898 IEA extrinsic component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059885 frmd3 FERM domain containing 3 protein_coding Danio_rerio
ENSMUSG00000049122 Frmd3 FERM domain containing 3 protein_coding Mus_musculus

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