C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription elongation factor A (SII)-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172465 TCEAL1 9606 + X:103628704-103630953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372624 TCEAL1-002 103628999-103630953 protein_coding
  ENST00000372625 TCEAL1-001 103628974-103630953 protein_coding
  ENST00000372626 TCEAL1-003 103628704-103630447 protein_coding
  ENST00000469820 TCEAL1-004 103628984-103630217 processed_transcript
  ENST00000619397 TCEAL1-201 103628964-103630946 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372624ENST00000372625ENST00000372626ENST00000469820ENST00000619397
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372624 7.671±0.00 9.038±0.00 N/A 16.683±0.00 N/A 8.673±0.00 6.640±0.00 7.299±4.86 2.040±0.00 N/A 3.099±0.15 16.941±20.44 6.929±0.08 26.198±0.00
ENST00000372625 N/A 8.886±0.00 1.170±0.00 N/A 2.337±0.36 3.517±0.00 N/A N/A 3.315±1.51 7.701±0.00 N/A 11.451±9.79 2.197±0.00 N/A
ENST00000372626 N/A N/A N/A N/A 5.589±0.00 13.586±0.00 N/A N/A 6.502±0.00 N/A N/A N/A N/A N/A
ENST00000469820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.701±0.00 N/A N/A
ENST00000619397 N/A N/A N/A 9.714±0.00 3.252±0.29 N/A 1.476±0.00 N/A 5.204±0.00 2.803±0.00 1.787±0.00 38.526±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AM CIL_0002AM_0001 CGP X:103607451-103630953
CIL_000724 CIL_000724_0001 CGP X:103628704-103688158

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000049536 Tceal1 transcription elongation factor A (SII)-like 1 protein_coding Mus_musculus

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