C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002AM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196507-ENSG00000172465 CGP 9606 X:103607451-103630953
GeneTranscriptPositionBiotype
ENSG00000172465 (TCEAL1)
transcription elongation factor A (SII)-like 1
ENST00000372624 (TCEAL1-002) 103628999-103630953 protein_coding
ENST00000372625 (TCEAL1-001) 103628974-103630953 protein_coding
ENST00000372626 (TCEAL1-003) 103628704-103630447 protein_coding
ENST00000469820 (TCEAL1-004) 103628984-103630217 processed_transcript
ENST00000619397 (TCEAL1-201) 103628964-103630946 protein_coding
ENSG00000196507 (TCEAL3)
transcription elongation factor A (SII)-like 3
ENST00000243286 (TCEAL3-201) 103607906-103609926 protein_coding
ENST00000372627 (TCEAL3-001) 103607906-103609927 protein_coding
ENST00000372628 (TCEAL3-002) 103607451-103609927 protein_coding
ENST00000477014 (TCEAL3-003) 103607971-103629690 processed_transcript
ENSG00000224031 (TCEAL3-AS1)
TCEAL3 antisense RNA 1
ENST00000424887 (TCEAL3-AS1-001) 103626076-103626492 antisense
CIL_0002AM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044550-ENSMUSG00000049536 CGP 10090 X:136590842-136711478
GeneTranscriptPositionBiotype
ENSMUSG00000044550 (Tceal3)
transcription elongation factor A (SII)-like 3
ENSMUST00000060904 (Tceal3-001) 136666375-136668378 protein_coding
ENSMUST00000113100 (Tceal3-006) 136666403-136668374 protein_coding
ENSMUST00000125067 (Tceal3-004) 136590848-136646507 processed_transcript
ENSMUST00000128040 (Tceal3-007) 136666611-136668065 protein_coding
ENSMUST00000138047 (Tceal3-002) 136590842-136667693 protein_coding
ENSMUST00000145648 (Tceal3-005) 136590844-136667549 protein_coding
ENSMUST00000153780 (Tceal3-003) 136590855-136647070 processed_transcript
ENSMUSG00000049536 (Tceal1)
transcription elongation factor A (SII)-like 1
ENSMUST00000055104 (Tceal1-001) 136707982-136711478 protein_coding
ENSMUSG00000080874 (Gm15010)
predicted gene 15010
ENSMUST00000117153 (Gm15010-001) 136701246-136701652 processed_pseudogene
ENSMUSG00000088864 (Gm23068)
predicted gene, 23068
ENSMUST00000158239 (Gm23068-201) 136704178-136704470 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AM_0001ENSG00000172465ENST00000372624ENST00000372625ENST00000372626ENST00000469820ENST00000619397ENSG00000196507ENST00000243286ENST00000372627ENST00000372628ENST00000477014ENSG00000224031ENST00000424887CIL_0002AM_0002ENSMUSG00000044550ENSMUST00000060904ENSMUST00000113100ENSMUST00000125067ENSMUST00000128040ENSMUST00000138047ENSMUST00000145648ENSMUST00000153780ENSMUSG00000049536ENSMUST00000055104ENSMUSG00000080874ENSMUST00000117153ENSMUSG00000088864ENSMUST00000158239
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AM_0001ENSG00000172465ENST00000372624ENST00000372625ENST00000372626ENST00000469820ENST00000619397ENSG00000196507ENST00000243286ENST00000372627ENSG00000224031ENST00000424887CIL_0002AM_0002ENSMUSG00000044550ENSMUST00000060904ENSMUST00000113100ENSMUST00000125067ENSMUST00000128040ENSMUST00000138047ENSMUST00000153780ENSMUSG00000049536ENSMUST00000055104ENSMUSG00000080874ENSMUST00000117153ENSMUSG00000088864ENSMUST00000158239
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172465 ENST00000372624 7.671±0.00 9.038±0.00 N/A 16.683±0.00 N/A 8.673±0.00 6.640±0.00 7.299±4.86 2.040±0.00 N/A 3.099±0.15 16.941±20.44 6.929±0.08 26.198±0.00
ENST00000372625 N/A 8.886±0.00 1.170±0.00 N/A 2.337±0.36 3.517±0.00 N/A N/A 3.315±1.51 7.701±0.00 N/A 11.451±9.79 2.197±0.00 N/A
ENST00000372626 N/A N/A N/A N/A 5.589±0.00 13.586±0.00 N/A N/A 6.502±0.00 N/A N/A N/A N/A N/A
ENST00000469820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.701±0.00 N/A N/A
ENST00000619397 N/A N/A N/A 9.714±0.00 3.252±0.29 N/A 1.476±0.00 N/A 5.204±0.00 2.803±0.00 1.787±0.00 38.526±0.00 N/A N/A
ENSG00000196507 ENST00000243286 N/A N/A N/A 17.496±14.54 N/A N/A 5.117±0.00 N/A 1.631±0.00 14.913±0.00 N/A N/A 4.794±0.18 N/A
ENST00000372627 17.486±0.00 29.483±0.00 0.917±0.00 22.929±17.64 5.253±4.32 11.157±10.17 4.479±4.06 23.405±0.00 2.961±0.00 6.537±4.89 3.982±0.00 45.522±31.13 13.300±1.69 33.348±20.41
ENST00000372628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224031 ENST00000424887 N/A N/A N/A N/A 0.376±0.00 N/A 1.812±0.00 0.212±0.00 N/A N/A N/A 0.138±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044550 ENSMUST00000060904 1.092±0.92 3.717±1.38 6.110±0.01 22.948±12.93 0.206±0.11 1.561±0.42 0.208±0.09 0.230±0.07 0.208±0.29 0.305±0.07 0.156±0.08 2.904±0.99 0.802±0.78 0.927±0.18
ENSMUST00000113100 0.511±0.24 2.200±0.48 N/A 4.448±1.12 0.263±0.05 0.426±0.19 0.262±0.11 0.197±0.13 0.092±0.00 0.341±0.09 N/A 1.216±0.39 0.289±0.00 0.223±0.02
ENSMUST00000125067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.02 N/A
ENSMUST00000128040 N/A N/A 3.476±0.16 67.670±58.72 0.185±0.00 N/A 0.136±0.04 N/A 0.478±0.31 N/A 0.237±0.11 9.695±1.50 0.596±0.15 4.160±0.00
ENSMUST00000138047 N/A N/A N/A 47.055±0.00 N/A N/A N/A N/A N/A N/A N/A 5.943±0.00 0.415±0.26 6.649±0.00
ENSMUST00000145648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A
ENSMUSG00000049536 ENSMUST00000055104 1.287±0.62 2.185±0.43 2.146±0.68 3.171±1.30 0.963±0.31 0.757±0.29 1.277±0.17 1.163±0.18 0.303±0.13 2.058±0.27 0.914±0.08 2.933±0.94 0.316±0.13 0.564±0.40
ENSMUSG00000080874 ENSMUST00000117153 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A 0.039±0.00 0.222±0.00 N/A 0.120±0.00 0.072±0.04 N/A
ENSMUSG00000088864 ENSMUST00000158239 N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.17 N/A

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