C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NIPA-like domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172548 NIPAL4 9606 + 5:157460019-157474717 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311946 NIPAL4-001 157460019-157474717 protein_coding
  ENST00000435489 NIPAL4-002 157460019-157473100 protein_coding
  ENST00000519150 NIPAL4-005 157460255-157472435 nonsense_mediated_decay
  ENST00000519946 NIPAL4-006 157460329-157468740 processed_transcript
  ENST00000521390 NIPAL4-003 157460216-157467968 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyMuscleOvaryPlacentaTestisENST00000311946ENST00000435489ENST00000519150ENST00000519946ENST00000521390
Transcript ID Brain Breast Heart Kidney Muscle Ovary Placenta Testis
ENST00000311946 2.017±0.00 0.029±0.00 0.022±0.00 0.031±0.00 0.005±0.00 0.454±0.45 0.068±0.00 0.059±0.00
ENST00000435489 0.370±0.00 N/A N/A N/A N/A 0.225±0.20 0.035±0.00 N/A
ENST00000519150 N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A
ENST00000519946 N/A N/A N/A N/A 1.925±0.00 N/A N/A N/A
ENST00000521390 N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094M CIL_00094M_0001 VISTA 5:157087063-157688799
CIL_00023R CIL_00023R_0001 CGP 5:157395534-157575775

Gene Ontology
GO IDEvidence TypeGO Description
GO:0015095 IEA magnesium ion transmembrane transporter activity
GO:0015693 IEA magnesium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059365 NIPAL4 NIPA-like domain containing 4 protein_coding Danio_rerio
ENSMUSG00000020411 Nipal4 NIPA-like domain containing 4 protein_coding Mus_musculus

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