C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00023R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135074-ENSG00000135074 CGP 9606 5:157395534-157575775
GeneTranscriptPositionBiotype
ENSG00000055163 (CYFIP2)
cytoplasmic FMR1 interacting protein 2 		ENST00000435847 (CYFIP2-006) 157266123-157393223 protein_coding
ENST00000518456 (CYFIP2-026) 157269375-157271576 processed_transcript
ENST00000518511 (CYFIP2-027) 157300818-157303123 retained_intron
ENST00000518555 (CYFIP2-019) 157325600-157328049 retained_intron
ENST00000519663 (CYFIP2-011) 157383256-157393233 retained_intron
ENST00000520424 (CYFIP2-020) 157327925-157341094 retained_intron
ENST00000520942 (CYFIP2-017) 157311038-157314370 retained_intron
ENST00000520960 (CYFIP2-018) 157323921-157328010 nonsense_mediated_decay
ENST00000521420 (CYFIP2-001) 157266128-157395595 protein_coding
ENST00000522463 (CYFIP2-007) 157266123-157393207 protein_coding
ENST00000522637 (CYFIP2-012) 157266128-157304274 nonsense_mediated_decay
ENST00000522775 (CYFIP2-025) 157384306-157390638 retained_intron
ENST00000522884 (CYFIP2-024) 157384306-157389542 retained_intron
ENST00000522892 (CYFIP2-021) 157361405-157383580 retained_intron
ENST00000523383 (CYFIP2-022) 157383232-157393233 retained_intron
ENST00000524058 (CYFIP2-023) 157383238-157389628 retained_intron
ENST00000541131 (CYFIP2-201) 157266177-157395598 protein_coding
ENST00000611075 (CYFIP2-014) 157266174-157300893 protein_coding
ENST00000611925 (CYFIP2-015) 157266711-157302890 protein_coding
ENST00000616178 (CYFIP2-003) 157266079-157393233 protein_coding
ENST00000617629 (CYFIP2-013) 157266139-157307864 protein_coding
ENST00000618329 (CYFIP2-002) 157269342-157393229 protein_coding
ENST00000620254 (CYFIP2-008) 157266081-157393224 protein_coding
ENST00000620969 (CYFIP2-202) 157266140-157393233 protein_coding
ENST00000621516 (CYFIP2-016) 157277059-157304300 nonsense_mediated_decay
ENST00000622696 (CYFIP2-004) 157266136-157304782 retained_intron
ENSG00000135074 (ADAM19)
ADAM metallopeptidase domain 19 		ENST00000257527 (ADAM19-001) 157477304-157575775 protein_coding
ENST00000517374 (ADAM19-004) 157477304-157502822 protein_coding
ENST00000517905 (ADAM19-003) 157481227-157575741 protein_coding
ENST00000517951 (ADAM19-002) 157395534-157575775 nonsense_mediated_decay
ENST00000519752 (ADAM19-005) 157570446-157575757 retained_intron
ENSG00000172548 (NIPAL4)
NIPA-like domain containing 4 		ENST00000311946 (NIPAL4-001) 157460019-157474717 protein_coding
ENST00000435489 (NIPAL4-002) 157460019-157473100 protein_coding
ENST00000519150 (NIPAL4-005) 157460255-157472435 nonsense_mediated_decay
ENST00000519946 (NIPAL4-006) 157460329-157468740 processed_transcript
ENST00000521390 (NIPAL4-003) 157460216-157467968 processed_transcript
ENSG00000251405 (CTB-109A12.1)
 ENST00000509655 (CTB-109A12.1-001) 157363382-157365501 sense_overlapping
ENST00000519499 (CTB-109A12.1-002) 157362615-157460078 sense_overlapping
ENSG00000253155 (CTB-47B11.1)
 ENST00000521237 (CTB-47B11.1-001) 157422439-157422873 processed_pseudogene
ENSG00000253519 (AC106801.1)
 ENST00000518054 (AC106801.1-001) 157565964-157569098 antisense
CIL_00023R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000011256-ENSMUSG00000020411 CGP 10090 11:46055992-46166508
GeneTranscriptPositionBiotype
ENSMUSG00000011256 (Adam19)
a disintegrin and metallopeptidase domain 19 (meltrin beta) 		ENSMUST00000011400 (Adam19-001) 46055992-46147343 protein_coding
ENSMUST00000137014 (Adam19-005) 46056058-46065082 processed_transcript
ENSMUST00000151565 (Adam19-002) 46127905-46143857 processed_transcript
ENSMUST00000153410 (Adam19-003) 46134122-46137648 retained_intron
ENSMUSG00000020411 (Nipal4)
NIPA-like domain containing 4 		ENSMUST00000020679 (Nipal4-001) 46148155-46166508 protein_coding
ENSMUSG00000086998 (Gm16033)
predicted gene 16033 		ENSMUST00000144915 (Gm16033-001) 46143783-46147116 antisense
ENSMUSG00000098942 (Mir8100)
microRNA 8100 		ENSMUST00000184230 (Mir8100-201) 46102270-46102390 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023R_0001ENSG00000055163ENST00000435847ENST00000519663ENST00000521420ENST00000522463ENST00000541131ENST00000618329ENST00000620254ENSG00000135074ENST00000257527ENST00000517951ENSG00000172548ENST00000311946ENST00000435489ENST00000519150ENST00000519946ENST00000521390ENSG00000251405ENST00000509655ENST00000519499ENSG00000253155ENST00000521237ENSG00000253519ENST00000518054CIL_00023R_0002ENSMUSG00000011256ENSMUST00000011400ENSMUST00000151565ENSMUSG00000020411ENSMUST00000020679ENSMUSG00000086998ENSMUST00000144915ENSMUSG00000098942ENSMUST00000184230
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000055163 ENST00000435847 N/A N/A N/A N/A N/A 1.536±0.00 N/A N/A N/A N/A 0.732±0.00 2.028±0.00 N/A 1.265±0.00
ENST00000518456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519663 4.224±0.00 53.850±0.00 N/A N/A N/A 7.247±0.00 N/A N/A N/A N/A 2.379±0.00 N/A 16.286±0.00 23.314±0.00
ENST00000520424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521420 0.530±0.00 N/A N/A 4.875±0.00 N/A 1.002±0.00 N/A N/A N/A N/A N/A N/A 1.733±0.00 N/A
ENST00000522463 N/A N/A N/A N/A N/A N/A N/A N/A 2.926±0.00 N/A N/A N/A N/A 2.506±0.00
ENST00000522637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541131 N/A 4.647±0.00 17.873±0.00 19.610±1.29 1.015±0.00 N/A 1.232±0.64 8.007±7.02 N/A N/A N/A 1.400±0.41 N/A N/A
ENST00000611075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618329 N/A N/A 13.569±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620254 1.100±0.00 N/A N/A 20.190±4.31 0.685±0.00 1.729±0.00 2.671±1.50 12.898±8.69 4.218±0.00 10.133±0.00 N/A 2.270±1.62 4.811±0.00 2.363±1.28
ENST00000620969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135074 ENST00000257527 0.963±0.00 8.025±0.00 N/A N/A 1.849±0.88 1.888±0.03 0.897±0.48 N/A 8.506±0.00 4.524±2.96 0.624±0.36 2.595±1.01 22.798±13.29 1.742±0.04
ENST00000517374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517951 N/A N/A N/A N/A N/A N/A 0.883±0.00 N/A N/A 2.558±0.00 N/A N/A N/A N/A
ENST00000519752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172548 ENST00000311946 N/A N/A N/A 2.017±0.00 0.029±0.00 N/A 0.022±0.00 0.031±0.00 N/A N/A 0.005±0.00 0.454±0.45 0.068±0.00 0.059±0.00
ENST00000435489 N/A N/A N/A 0.370±0.00 N/A N/A N/A N/A N/A N/A N/A 0.225±0.20 0.035±0.00 N/A
ENST00000519150 N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A
ENST00000519946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.925±0.00 N/A N/A N/A
ENST00000521390 N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251405 ENST00000509655 N/A 0.293±0.00 0.339±0.00 N/A 0.194±0.00 N/A 0.104±0.00 0.334±0.27 0.010±0.00 0.326±0.00 N/A 0.043±0.02 0.077±0.05 0.026±0.00
ENST00000519499 N/A 0.694±0.00 N/A N/A 0.398±0.00 N/A 0.094±0.05 N/A N/A 0.533±0.00 0.079±0.00 0.114±0.09 0.472±0.00 0.051±0.00
ENSG00000253155 ENST00000521237 N/A N/A N/A 0.124±0.00 0.030±0.00 N/A N/A 0.030±0.00 N/A N/A 0.027±0.00 N/A N/A N/A
ENSG00000253519 ENST00000518054 0.067±0.00 N/A N/A 0.034±0.01 0.332±0.32 0.031±0.01 0.040±0.02 0.105±0.07 0.336±0.33 0.033±0.02 N/A 0.033±0.03 0.016±0.00 0.052±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000011256 ENSMUST00000011400 8.729±2.51 1.172±0.65 6.859±1.25 4.538±3.10 6.986±1.29 7.197±0.77 7.527±0.95 1.182±0.22 0.686±0.43 12.366±0.36 0.561±0.18 6.142±1.47 27.527±18.44 0.237±0.08
ENSMUST00000137014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151565 N/A 0.546±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020411 ENSMUST00000020679 0.765±0.64 0.059±0.04 10.953±1.17 0.231±0.05 0.921±0.38 1.556±0.23 0.064±0.02 0.107±0.04 0.043±0.02 1.996±1.66 0.035±0.02 1.271±0.58 0.776±0.38 0.075±0.07
ENSMUSG00000086998 ENSMUST00000144915 N/A N/A N/A N/A N/A N/A N/A N/A 0.345±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000098942 ENSMUST00000184230 N/A N/A N/A 7.757±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 8.088±3.77 N/A

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