C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L52
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172590 MRPL52 9606 + 14:22829879-22835037 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311892 MRPL52-017 22829916-22834977 protein_coding
  ENST00000355151 MRPL52-003 22829883-22835037 protein_coding
  ENST00000397496 MRPL52-001 22829887-22835037 protein_coding
  ENST00000397505 MRPL52-005 22829913-22834347 protein_coding
  ENST00000432849 MRPL52-014 22829903-22834346 protein_coding
  ENST00000461594 MRPL52-004 22829929-22833468 processed_transcript
  ENST00000553482 MRPL52-012 22829887-22830669 retained_intron
  ENST00000553711 MRPL52-016 22829906-22834345 protein_coding
  ENST00000553965 MRPL52-009 22833267-22834282 retained_intron
  ENST00000555345 MRPL52-018 22829895-22834717 protein_coding
  ENST00000555536 MRPL52-015 22830049-22834346 protein_coding
  ENST00000556214 MRPL52-011 22829887-22830541 retained_intron
  ENST00000556465 MRPL52-006 22829910-22834234 protein_coding
  ENST00000556654 MRPL52-013 22829887-22834346 processed_transcript
  ENST00000556840 MRPL52-020 22829921-22834347 protein_coding
  ENST00000557221 MRPL52-019 22829914-22834828 protein_coding
  ENST00000557543 MRPL52-007 22829879-22832078 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355151ENST00000397496ENST00000397505ENST00000432849ENST00000553711ENST00000555345ENST00000556654ENST00000556840ENST00000557221ENST00000557543
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355151 2.982±0.00 4.735±0.00 0.219±0.00 1.532±0.57 1.987±0.00 3.808±2.93 1.617±1.44 7.503±0.00 0.507±0.00 1.849±0.00 1.093±0.00 7.118±0.00 6.412±1.84 6.991±0.00
ENST00000397496 N/A N/A N/A N/A 0.559±0.00 N/A 0.178±0.00 N/A 0.518±0.00 N/A N/A 3.925±0.97 N/A N/A
ENST00000397505 5.744±0.00 N/A N/A N/A N/A N/A N/A 2.903±0.00 15.429±0.00 N/A N/A N/A 21.007±0.00 N/A
ENST00000432849 N/A N/A N/A 2.348±0.00 N/A N/A N/A 4.316±0.00 N/A N/A 7.625±5.66 N/A N/A N/A
ENST00000553711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.802±0.00 N/A N/A
ENST00000555345 N/A N/A 0.606±0.00 1.787±0.00 N/A N/A N/A 1.911±0.00 N/A 0.662±0.00 N/A N/A N/A N/A
ENST00000556654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.959±0.00 42.747±0.00 19.646±0.00
ENST00000556840 10.200±0.00 19.884±0.00 N/A 7.081±3.46 7.767±2.41 18.645±0.00 15.916±14.62 28.839±0.00 23.445±21.28 18.202±12.97 24.225±0.00 35.111±12.25 64.701±9.13 16.083±7.81
ENST00000557221 N/A N/A N/A 1.987±0.00 1.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557543 N/A N/A N/A 0.553±0.23 0.770±0.12 0.586±0.00 N/A N/A N/A 0.598±0.00 N/A 0.786±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002HE CIL_0002HE_0001 CGP 14:22773222-22835037
CIL_0004Z1 CIL_0004Z1_0002 CGP 14:22829879-22849027

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 ISS structural constituent of ribosome
GO:0005739 IEA mitochondrion
GO:0005762 ISS mitochondrial large ribosomal subunit
GO:0006412 ISS translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090568 MRPL52 mitochondrial ribosomal protein L52 protein_coding Danio_rerio
ENSMUSG00000010406 Mrpl52 mitochondrial ribosomal protein L52 protein_coding Mus_musculus

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