C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004Z1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090568-ENSDARG00000002235 CGP 7955 7:25281977-25316761
GeneTranscriptPositionBiotype
ENSDARG00000002235 (mmp14a)
matrix metalloproteinase 14a (membrane-inserted) 		ENSDART00000005884 (mmp14a-001) 25291382-25316761 protein_coding
ENSDARG00000090568 (MRPL52)
mitochondrial ribosomal protein L52 		ENSDART00000127177 (MRPL52-201) 25281977-25284234 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004Z1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172590-ENSG00000157227 CGP 9606 14:22829879-22849027
GeneTranscriptPositionBiotype
ENSG00000157227 (MMP14)
matrix metallopeptidase 14 (membrane-inserted) 		ENST00000311852 (MMP14-001) 22836557-22847761 protein_coding
ENST00000547074 (MMP14-005) 22836560-22841684 retained_intron
ENST00000547279 (MMP14-006) 22836620-22837286 non_stop_decay
ENST00000547596 (MMP14-008) 22841621-22842468 retained_intron
ENST00000548162 (MMP14-003) 22836576-22849027 processed_transcript
ENST00000548761 (MMP14-007) 22837312-22842593 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0004Z1_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000010406-ENSMUSG00000000957 CGP 10090 14:54426909-54441258
GeneTranscriptPositionBiotype
ENSMUSG00000000957 (Mmp14)
matrix metallopeptidase 14 (membrane-inserted) 		ENSMUST00000089688 (Mmp14-201) 54431604-54441258 protein_coding
ENSMUSG00000010406 (Mrpl52)
mitochondrial ribosomal protein L52 		ENSMUST00000010550 (Mrpl52-201) 54426909-54429750 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Z1_0001ENSDARG00000002235ENSDART00000005884ENSDARG00000090568ENSDART00000127177CIL_0004Z1_0002ENSG00000157227ENST00000311852ENST00000547074ENST00000547279ENST00000547596ENST00000548162ENST00000548761CIL_0004Z1_0003ENSMUSG00000000957ENSMUST00000089688ENSMUSG00000010406ENSMUST00000010550
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Z1_0001ENSDARG00000002235ENSDART00000005884ENSDARG00000090568ENSDART00000127177CIL_0004Z1_0002ENSG00000157227ENST00000311852ENST00000548162CIL_0004Z1_0003ENSMUSG00000000957ENSMUST00000089688ENSMUSG00000010406ENSMUST00000010550
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002235 ENSDART00000005884 N/A N/A N/A 2.006±0.53 N/A N/A 2.990±0.94 4.995±1.34 0.694±0.00 N/A 9.830±0.00 N/A N/A N/A
ENSDARG00000090568 ENSDART00000127177 N/A N/A N/A 8.837±7.82 N/A N/A 70.705±2.57 38.623±0.00 2.323±0.00 N/A 23.148±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157227 ENST00000311852 99.486±0.00 25.228±0.00 1.491±0.00 2.113±1.56 16.433±9.60 39.445±36.16 3.479±2.87 1.560±0.57 3.552±0.60 2.173±0.00 4.140±3.56 57.497±39.17 157.732±42.71 23.343±17.28
ENST00000547074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548162 N/A N/A N/A 0.968±0.00 15.026±0.00 0.959±0.00 0.783±0.00 N/A 4.388±0.00 2.976±0.00 0.229±0.00 3.508±0.00 N/A N/A
ENST00000548761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000957 ENSMUST00000089688 37.068±22.05 50.891±6.73 61.479±9.93 22.673±4.45 125.103±44.15 65.655±17.20 7.140±2.30 12.456±4.35 17.115±4.25 45.136±3.18 0.422±0.00 153.935±52.88 15.844±8.07 3.089±1.61
ENSMUSG00000010406 ENSMUST00000010550 85.072±18.35 1080.512±182.51 121.333±14.46 66.277±21.48 119.538±37.75 293.304±121.57 52.202±23.04 165.383±19.56 293.138±154.65 97.111±22.23 64.382±5.41 179.516±86.67 86.510±27.46 51.050±10.77

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