C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAD9 homolog A (S. pombe)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172613 RAD9A 9606 + 11:67317871-67398410 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307980 RAD9A-001 67391952-67398409 protein_coding
  ENST00000529100 RAD9A-003 67393305-67397390 processed_transcript
  ENST00000530934 RAD9A-002 67392882-67396315 retained_intron
  ENST00000535644 RAD9A-009 67395670-67398410 processed_transcript
  ENST00000538013 RAD9A-004 67391958-67397424 nonsense_mediated_decay
  ENST00000541132 RAD9A-008 67391983-67393783 retained_intron
  ENST00000542139 RAD9A-006 67391976-67395807 nonsense_mediated_decay
  ENST00000543808 RAD9A-005 67391705-67396022 processed_transcript
  ENST00000544620 RAD9A-007 67391958-67396312 protein_coding
  ENST00000621995 RAD9A-010 67376013-67392074 protein_coding
  ENST00000622583 RAD9A-011 67317871-67391434 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000307980
Transcript ID Testis
ENST00000307980 7.817±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000075 IEA cell cycle checkpoint
GO:0000076 TAS DNA replication checkpoint
GO:0000077 IMP:IEA DNA damage checkpoint
GO:0000738 IEA DNA catabolic process, exonucleolytic
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006260 TAS DNA replication
GO:0006281 IEA DNA repair
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0008408 IDA 3'-5' exonuclease activity
GO:0008853 IEA exodeoxyribonuclease III activity
GO:0017124 IPI SH3 domain binding
GO:0019899 IPI enzyme binding
GO:0019901 IPI protein kinase binding
GO:0030896 IEA checkpoint clamp complex
GO:0031573 IEA intra-S DNA damage checkpoint
GO:0042826 IPI histone deacetylase binding
GO:0071479 IDA cellular response to ionizing radiation
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis
GO:1902231 IEA positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056984 rad9a RAD9 homolog A protein_coding Danio_rerio
ENSMUSG00000024824 Rad9a RAD9 homolog A protein_coding Mus_musculus

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