C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD9 homolog A (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307980 RAD9A-001 ENSG00000172613 9606 + 11:67391952-67398409 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000307980
Transcript ID Testis
ENST00000307980 7.817±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000075 IEA cell cycle checkpoint
GO:0000076 TAS DNA replication checkpoint
GO:0000077 IMP:IEA DNA damage checkpoint
GO:0000738 IEA DNA catabolic process, exonucleolytic
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006260 TAS DNA replication
GO:0006281 IEA DNA repair
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0008408 IDA 3'-5' exonuclease activity
GO:0008853 IEA exodeoxyribonuclease III activity
GO:0017124 IPI SH3 domain binding
GO:0019899 IPI enzyme binding
GO:0019901 IPI protein kinase binding
GO:0030896 IEA checkpoint clamp complex
GO:0031573 IEA intra-S DNA damage checkpoint
GO:0042826 IPI histone deacetylase binding
GO:0071479 IDA cellular response to ionizing radiation
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis
GO:1902231 IEA positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000181329 RAD9A-201 protein_coding Mus_musculus 0 1166
ENSMUST00000025740 Rad9a-201 protein_coding Mus_musculus 0 1166
ENSMUST00000180575 PPP1CA-201 protein_coding Mus_musculus 0 211
ENSMUST00000046094 Ppp1ca-201 protein_coding Mus_musculus 0 211

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