C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF-hand calcium binding domain 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172771 EFCAB12 9606 - 3:129401321-129428651 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326085 EFCAB12-201 129401322-129428651 protein_coding
  ENST00000503498 EFCAB12-002 129401326-129421583 retained_intron
  ENST00000503957 EFCAB12-004 129411267-129428617 protein_coding
  ENST00000505956 EFCAB12-001 129401321-129428651 protein_coding
  ENST00000514900 EFCAB12-003 129401322-129418523 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326085ENST00000503498ENST00000503957ENST00000505956ENST00000514900
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326085 N/A 0.337±0.00 0.091±0.00 0.135±0.00 0.675±0.00 N/A 0.032±0.00 N/A 0.611±0.00 3.014±0.00 N/A 2.136±1.68 0.011±0.00 1.972±0.68
ENST00000503498 0.022±0.00 0.173±0.00 N/A 0.027±0.00 N/A 0.048±0.00 0.118±0.00 0.048±0.00 0.105±0.00 N/A 0.027±0.00 0.283±0.00 0.044±0.03 0.732±0.00
ENST00000503957 N/A N/A 0.358±0.00 0.255±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505956 N/A N/A 0.088±0.00 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A 0.011±0.00 N/A
ENST00000514900 N/A 0.218±0.00 N/A 0.025±0.00 0.070±0.00 0.036±0.00 N/A 0.291±0.00 0.295±0.00 0.953±0.00 N/A 0.416±0.29 N/A 1.158±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030X CIL_00030X_0001 CGP 3:129401321-129440179

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030321 Efcab12 EF-hand calcium binding domain 12 protein_coding Mus_musculus

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