C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 192, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172775 FAM192A 9606 - 16:57152466-57186116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309137 FAM192A-001 57152466-57186064 protein_coding
  ENST00000389447 FAM192A-201 57153737-57173881 protein_coding
  ENST00000562324 FAM192A-005 57164052-57186116 protein_coding
  ENST00000562400 FAM192A-020 57178526-57181790 processed_transcript
  ENST00000562406 FAM192A-012 57167153-57185817 protein_coding
  ENST00000564108 FAM192A-017 57154279-57186032 protein_coding
  ENST00000564424 FAM192A-009 57173781-57174886 protein_coding
  ENST00000565353 FAM192A-019 57178514-57185962 processed_transcript
  ENST00000565458 FAM192A-015 57167131-57186039 protein_coding
  ENST00000565760 FAM192A-006 57172309-57186055 protein_coding
  ENST00000565956 FAM192A-014 57154135-57173788 protein_coding
  ENST00000566077 FAM192A-013 57154143-57186032 protein_coding
  ENST00000566403 FAM192A-003 57153736-57175690 nonsense_mediated_decay
  ENST00000566481 FAM192A-007 57172334-57186031 protein_coding
  ENST00000566584 FAM192A-008 57167185-57186022 protein_coding
  ENST00000566681 FAM192A-021 57173773-57186039 protein_coding
  ENST00000567044 FAM192A-010 57167093-57185822 protein_coding
  ENST00000567439 FAM192A-018 57154200-57186040 protein_coding
  ENST00000568671 FAM192A-011 57172279-57185817 protein_coding
  ENST00000569266 FAM192A-002 57154145-57178557 protein_coding
  ENST00000570184 FAM192A-016 57172809-57186064 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309137ENST00000389447ENST00000562324ENST00000562406ENST00000564108ENST00000565458ENST00000565956ENST00000566403ENST00000566584ENST00000567044ENST00000567439ENST00000569266
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309137 5.394±0.00 3.424±0.00 22.246±5.46 5.329±1.97 4.154±0.18 3.075±0.74 6.326±0.00 2.593±0.27 2.240±0.34 3.053±0.04 8.873±4.62 10.124±1.65 12.901±0.00
ENST00000389447 N/A 1.685±0.00 N/A 3.512±0.00 7.723±0.00 1.542±0.00 5.907±3.20 N/A 4.530±0.00 N/A N/A 14.540±1.74 N/A
ENST00000562324 N/A 4.559±0.00 N/A N/A 2.736±0.00 2.920±0.00 N/A N/A N/A N/A 12.012±7.31 29.896±0.00 52.156±0.00
ENST00000562406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.046±0.00 23.438±0.00 62.952±0.00
ENST00000564108 N/A N/A N/A N/A N/A N/A N/A N/A 2.146±0.00 N/A N/A N/A N/A
ENST00000565458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.822±0.00
ENST00000565956 N/A N/A N/A N/A 9.847±0.00 N/A 17.725±0.00 9.283±0.00 14.197±0.00 9.059±0.00 N/A N/A N/A
ENST00000566403 N/A N/A N/A N/A N/A 3.574±0.00 N/A 2.344±0.00 2.894±0.00 N/A N/A N/A N/A
ENST00000566584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.290±0.00 N/A N/A
ENST00000567044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.500±0.00 N/A N/A
ENST00000567439 7.666±0.00 N/A N/A N/A N/A N/A 1.330±0.00 N/A N/A N/A N/A N/A N/A
ENST00000569266 N/A N/A 11.669±0.00 3.540±0.00 3.182±0.00 N/A N/A 5.692±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000524 CIL_000524_0002 CGP 16:57092537-57186116
CIL_000527 CIL_000527_0002 CGP 16:57152466-57240475

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041631 fam192a family with sequence similarity 192, member A protein_coding Danio_rerio
ENSMUSG00000031774 Fam192a family with sequence similarity 192, member A protein_coding Mus_musculus

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