C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000524_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007753-ENSDARG00000041631 CGP 7955 18:17319570-17383463
GeneTranscriptPositionBiotype
ENSDARG00000007753 (cpne2)
copine II 		ENSDART00000021213 (cpne2-001) 17323066-17362630 protein_coding
ENSDART00000143475 (cpne2-002) 17319570-17331711 protein_coding
ENSDARG00000041631 (fam192a)
family with sequence similarity 192, member A 		ENSDART00000061016 (fam192a-001) 17366856-17380978 protein_coding
ENSDART00000121553 (fam192a-201) 17366856-17383463 protein_coding
ENSDART00000135590 (fam192a-002) 17367126-17371835 retained_intron
ENSDARG00000082214 (BX470074.1)
 ENSDART00000115625 (BX470074.1-201) 17354241-17354307 miRNA
ENSDARG00000083999 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000119399 (5S_rRNA.461-201) 17334508-17334623 rRNA
CIL_000524_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140848-ENSG00000172775 CGP 9606 16:57092537-57186116
GeneTranscriptPositionBiotype
ENSG00000140848 (CPNE2)
copine II 		ENST00000290776 (CPNE2-001) 57092537-57148367 protein_coding
ENST00000535318 (CPNE2-002) 57092607-57147966 protein_coding
ENST00000565766 (CPNE2-009) 57119199-57137248 protein_coding
ENST00000565874 (CPNE2-003) 57110551-57147795 protein_coding
ENST00000565951 (CPNE2-005) 57124248-57147964 processed_transcript
ENST00000566042 (CPNE2-004) 57123306-57147964 retained_intron
ENST00000566259 (CPNE2-008) 57106051-57113352 protein_coding
ENST00000566910 (CPNE2-006) 57129052-57147966 processed_transcript
ENST00000567011 (CPNE2-010) 57145640-57147769 retained_intron
ENST00000567487 (CPNE2-007) 57112842-57119639 protein_coding
ENSG00000172775 (FAM192A)
family with sequence similarity 192, member A 		ENST00000309137 (FAM192A-001) 57152466-57186064 protein_coding
ENST00000389447 (FAM192A-201) 57153737-57173881 protein_coding
ENST00000562324 (FAM192A-005) 57164052-57186116 protein_coding
ENST00000562400 (FAM192A-020) 57178526-57181790 processed_transcript
ENST00000562406 (FAM192A-012) 57167153-57185817 protein_coding
ENST00000564108 (FAM192A-017) 57154279-57186032 protein_coding
ENST00000564424 (FAM192A-009) 57173781-57174886 protein_coding
ENST00000565353 (FAM192A-019) 57178514-57185962 processed_transcript
ENST00000565458 (FAM192A-015) 57167131-57186039 protein_coding
ENST00000565760 (FAM192A-006) 57172309-57186055 protein_coding
ENST00000565956 (FAM192A-014) 57154135-57173788 protein_coding
ENST00000566077 (FAM192A-013) 57154143-57186032 protein_coding
ENST00000566403 (FAM192A-003) 57153736-57175690 nonsense_mediated_decay
ENST00000566481 (FAM192A-007) 57172334-57186031 protein_coding
ENST00000566584 (FAM192A-008) 57167185-57186022 protein_coding
ENST00000566681 (FAM192A-021) 57173773-57186039 protein_coding
ENST00000567044 (FAM192A-010) 57167093-57185822 protein_coding
ENST00000567439 (FAM192A-018) 57154200-57186040 protein_coding
ENST00000568671 (FAM192A-011) 57172279-57185817 protein_coding
ENST00000569266 (FAM192A-002) 57154145-57178557 protein_coding
ENST00000570184 (FAM192A-016) 57172809-57186064 protein_coding
ENSG00000279019 (RP11-407G23.2)
 ENST00000623921 (RP11-407G23.2-001) 57140896-57144586 TEC
ENSG00000279803 (RP11-407G23.5)
 ENST00000624886 (RP11-407G23.5-001) 57142652-57144936 TEC
CIL_000524_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034361-ENSMUSG00000031774 CGP 10090 8:94532990-94601726
GeneTranscriptPositionBiotype
ENSMUSG00000031774 (Fam192a)
family with sequence similarity 192, member A 		ENSMUST00000034226 (Fam192a-201) 94574943-94601726 protein_coding
ENSMUSG00000034361 (Cpne2)
copine II 		ENSMUST00000048653 (Cpne2-001) 94532990-94570529 protein_coding
ENSMUST00000109537 (Cpne2-002) 94533067-94570390 protein_coding
ENSMUST00000136550 (Cpne2-003) 94533067-94549823 processed_transcript
ENSMUST00000156377 (Cpne2-004) 94562650-94570114 retained_intron
ENSMUST00000156894 (Cpne2-005) 94533039-94548827 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000524_0001ENSDARG00000007753ENSDART00000021213ENSDART00000143475ENSDARG00000041631ENSDART00000061016ENSDART00000121553ENSDART00000135590ENSDARG00000082214ENSDART00000115625ENSDARG00000083999ENSDART00000119399CIL_000524_0002ENSG00000140848ENST00000290776ENST00000535318ENST00000565766ENST00000565874ENST00000565951ENST00000566042ENST00000566259ENST00000566910ENST00000567011ENST00000567487ENSG00000172775ENST00000309137ENST00000389447ENST00000562324ENST00000562400ENST00000562406ENST00000564108ENST00000564424ENST00000565353ENST00000565458ENST00000565760ENST00000565956ENST00000566077ENST00000566403ENST00000566481ENST00000566584ENST00000566681ENST00000567044ENST00000567439ENST00000568671ENST00000569266ENST00000570184ENSG00000279019ENST00000623921ENSG00000279803ENST00000624886CIL_000524_0003ENSMUSG00000031774ENSMUST00000034226ENSMUSG00000034361ENSMUST00000048653ENSMUST00000109537ENSMUST00000136550ENSMUST00000156377ENSMUST00000156894
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000524_0001ENSDARG00000007753ENSDART00000021213ENSDARG00000041631ENSDART00000061016ENSDART00000121553ENSDART00000135590ENSDARG00000082214ENSDART00000115625ENSDARG00000083999ENSDART00000119399CIL_000524_0002ENSG00000140848ENST00000290776ENST00000535318ENST00000565766ENST00000565874ENST00000565951ENST00000566042ENST00000566259ENST00000566910ENST00000567487ENSG00000172775ENST00000309137ENST00000389447ENST00000562324ENST00000562406ENST00000564108ENST00000565458ENST00000565956ENST00000566403ENST00000566584ENST00000567044ENST00000567439ENST00000569266ENSG00000279019ENST00000623921ENSG00000279803ENST00000624886CIL_000524_0003ENSMUSG00000031774ENSMUST00000034226ENSMUSG00000034361ENSMUST00000048653ENSMUST00000109537ENSMUST00000136550ENSMUST00000156377ENSMUST00000156894
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007753 ENSDART00000021213 N/A N/A N/A 11.946±6.46 N/A N/A 0.422±0.12 8.756±1.76 0.088±0.00 N/A N/A N/A N/A N/A
ENSDART00000143475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000041631 ENSDART00000061016 N/A N/A N/A 3.930±1.80 N/A N/A 4.509±0.98 N/A 1.215±0.00 N/A N/A N/A N/A N/A
ENSDART00000121553 N/A N/A N/A 2.860±0.90 N/A N/A N/A N/A N/A N/A 2.539±0.00 N/A N/A N/A
ENSDART00000135590 N/A N/A N/A 1.186±0.00 N/A N/A 1.910±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000082214 ENSDART00000115625 N/A N/A N/A 181.905±0.00 N/A N/A 6.845±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000083999 ENSDART00000119399 N/A N/A N/A 83.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140848 ENST00000290776 N/A N/A N/A 1.578±0.00 1.105±0.00 0.872±0.00 N/A N/A N/A N/A 0.687±0.62 2.513±0.00 N/A N/A
ENST00000535318 N/A N/A N/A 7.070±0.00 1.816±0.00 N/A 4.346±0.00 1.965±0.81 2.442±0.00 6.802±0.00 4.284±0.00 12.230±1.55 11.314±4.59 9.904±0.00
ENST00000565766 N/A N/A N/A N/A N/A N/A N/A N/A 1.845±0.00 N/A N/A N/A N/A N/A
ENST00000565874 7.777±0.00 N/A 1.704±0.00 8.601±6.67 16.821±0.00 7.932±6.38 1.326±0.59 8.993±0.00 1.824±0.09 5.684±2.77 5.465±0.00 2.080±1.26 11.076±5.60 5.033±0.19
ENST00000565951 N/A N/A 0.414±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566042 N/A N/A N/A 2.835±0.00 0.570±0.00 N/A 0.197±0.00 0.219±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.296±0.00
ENST00000566910 N/A N/A N/A N/A N/A 8.582±0.00 N/A N/A N/A 8.938±0.00 N/A N/A 7.692±0.00 6.085±0.00
ENST00000567011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.508±0.00 2.109±0.00 N/A N/A
ENSG00000172775 ENST00000309137 5.394±0.00 N/A 3.424±0.00 22.246±5.46 5.329±1.97 4.154±0.18 3.075±0.74 6.326±0.00 2.593±0.27 2.240±0.34 3.053±0.04 8.873±4.62 10.124±1.65 12.901±0.00
ENST00000389447 N/A N/A 1.685±0.00 N/A 3.512±0.00 7.723±0.00 1.542±0.00 5.907±3.20 N/A 4.530±0.00 N/A N/A 14.540±1.74 N/A
ENST00000562324 N/A N/A 4.559±0.00 N/A N/A 2.736±0.00 2.920±0.00 N/A N/A N/A N/A 12.012±7.31 29.896±0.00 52.156±0.00
ENST00000562400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.046±0.00 23.438±0.00 62.952±0.00
ENST00000564108 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.146±0.00 N/A N/A N/A N/A
ENST00000564424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.822±0.00
ENST00000565760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565956 N/A N/A N/A N/A N/A 9.847±0.00 N/A 17.725±0.00 9.283±0.00 14.197±0.00 9.059±0.00 N/A N/A N/A
ENST00000566077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566403 N/A N/A N/A N/A N/A N/A 3.574±0.00 N/A 2.344±0.00 2.894±0.00 N/A N/A N/A N/A
ENST00000566481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.290±0.00 N/A N/A
ENST00000566681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.500±0.00 N/A N/A
ENST00000567439 7.666±0.00 N/A N/A N/A N/A N/A N/A 1.330±0.00 N/A N/A N/A N/A N/A N/A
ENST00000568671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569266 N/A N/A N/A 11.669±0.00 3.540±0.00 3.182±0.00 N/A N/A 5.692±0.00 N/A N/A N/A N/A N/A
ENST00000570184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279019 ENST00000623921 0.077±0.00 0.265±0.00 N/A 0.517±0.42 0.316±0.13 N/A 0.041±0.00 N/A 0.041±0.03 N/A 0.033±0.00 0.091±0.03 N/A 0.041±0.02
ENSG00000279803 ENST00000624886 0.279±0.00 0.738±0.00 N/A 1.185±1.01 0.538±0.36 0.120±0.01 0.087±0.03 0.071±0.00 0.091±0.00 0.229±0.18 0.067±0.00 0.331±0.16 0.158±0.04 0.300±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031774 ENSMUST00000034226 13.544±3.88 18.152±1.05 15.779±0.30 26.323±1.66 12.017±3.29 14.690±3.51 7.567±2.95 10.915±3.45 12.141±4.70 8.928±0.44 9.206±1.49 15.099±5.96 14.121±7.34 9.412±3.72
ENSMUSG00000034361 ENSMUST00000048653 13.640±4.01 6.868±2.77 6.975±0.69 4.826±1.99 10.411±5.09 17.351±2.67 1.573±0.70 5.940±0.67 2.388±1.05 3.979±1.63 1.402±0.51 5.809±1.66 1.359±0.61 0.337±0.10
ENSMUST00000109537 10.226±5.78 2.799±0.00 3.871±0.35 2.634±0.60 7.960±1.42 N/A 0.931±0.12 1.821±0.00 0.496±0.18 1.713±0.54 0.918±0.52 1.898±0.45 0.675±0.32 0.383±0.15
ENSMUST00000136550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.16
ENSMUST00000156377 27.763±0.00 10.830±1.50 N/A 7.179±0.00 17.830±3.87 18.674±4.24 2.339±0.00 5.558±1.15 2.446±0.89 6.250±2.15 N/A 10.117±2.55 1.650±0.53 0.859±0.22
ENSMUST00000156894 N/A 33.911±10.92 N/A N/A N/A 17.009±0.00 N/A N/A N/A N/A N/A 11.765±1.53 N/A N/A

Loading