C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GDP-mannose pyrophosphorylase B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173540 GMPPB 9606 - 3:49716844-49723951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308375 GMPPB-002 49719924-49723951 protein_coding
  ENST00000308388 GMPPB-003 49721476-49723949 protein_coding
  ENST00000480687 GMPPB-001 49716844-49723951 protein_coding
  ENST00000481959 GMPPB-004 49722732-49723943 retained_intron
  ENST00000495627 GMPPB-005 49722992-49723916 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308375ENST00000480687
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308375 5.813±0.00 10.463±0.00 7.541±0.00 7.007±3.13 4.656±1.28 6.458±0.00 36.376±0.00 27.315±0.00 9.000±0.00 27.845±0.00 5.844±2.45 11.158±0.00 12.062±0.00
ENST00000480687 N/A 4.839±0.00 N/A N/A N/A N/A N/A N/A 1.537±0.00 N/A 5.218±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NE CIL_0005NE_0002 CGP 3:49689499-49721529

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004475 IEA mannose-1-phosphate guanylyltransferase activity
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0009298 IEA GDP-mannose biosynthetic process
GO:0016779 IEA nucleotidyltransferase activity
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017658 gmppb GDP-mannose pyrophosphorylase B protein_coding Danio_rerio
ENSMUSG00000070284 Gmppb GDP-mannose pyrophosphorylase B protein_coding Mus_musculus

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