C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005NE_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000031269-ENSDARG00000031269 | CGP | 7955 | 22:37201649-37423864  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000031269  (rnf123)ring finger protein 123 |
ENSDART00000044429 (rnf123-201)
|
37201649-37423864 | protein_coding | |
|
ENSDART00000148147 (rnf123-001)
|
37205942-37407161 | protein_coding | ||
|
ENSDARG00000074469 (amigo3) adhesion molecule with Ig-like domain 3 |
ENSDART00000109860 (amigo3-001)
|
37285903-37287363 | protein_coding | |
|
ENSDART00000156615 (amigo3-201)
|
37285885-37287363 | protein_coding | ||
| CIL_0005NE_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000164068-ENSG00000164068 | CGP | 9606 | 3:49689499-49721529 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000164068 (RNF123) ring finger protein 123 |
ENST00000327697 (RNF123-001)
|
49689499-49721527 | protein_coding | |
|
ENST00000432042 (RNF123-002)
|
49689538-49712830 | protein_coding | ||
|
ENST00000433785 (RNF123-007)
|
49712830-49721526 | protein_coding | ||
|
ENST00000443204 (RNF123-009)
|
49689557-49697412 | nonsense_mediated_decay | ||
|
ENST00000444689 (RNF123-012)
|
49713527-49715889 | nonsense_mediated_decay | ||
|
ENST00000454491 (RNF123-008)
|
49689557-49697204 | protein_coding | ||
|
ENST00000457726 (RNF123-003)
|
49689544-49721527 | nonsense_mediated_decay | ||
|
ENST00000469978 (RNF123-011)
|
49712550-49716043 | retained_intron | ||
|
ENST00000486102 (RNF123-005)
|
49689562-49721529 | retained_intron | ||
|
ENST00000487805 (RNF123-006)
|
49689565-49721527 | retained_intron | ||
|
ENST00000494005 (RNF123-010)
|
49700500-49702110 | retained_intron | ||
|
ENST00000497099 (RNF123-013)
|
49718104-49720890 | processed_transcript | ||
|
ENST00000498376 (RNF123-014)
|
49720559-49721529 | retained_intron | ||
|
ENSG00000173531 (MST1) macrophage stimulating 1 (hepatocyte growth factor-like) |
ENST00000448220 (MST1-015)
|
49683947-49685090 | protein_coding | |
|
ENST00000449682 (MST1-001)
|
49683947-49689053 | protein_coding | ||
|
ENST00000468847 (MST1-022)
|
49685683-49686187 | retained_intron | ||
|
ENST00000479115 (MST1-008)
|
49683976-49686852 | retained_intron | ||
|
ENST00000480268 (MST1-020)
|
49685407-49686270 | retained_intron | ||
|
ENST00000481055 (MST1-026)
|
49687040-49688068 | retained_intron | ||
|
ENST00000481930 (MST1-013)
|
49684738-49685785 | retained_intron | ||
|
ENST00000484144 (MST1-019)
|
49684325-49685298 | retained_intron | ||
|
ENST00000484269 (MST1-018)
|
49684738-49687462 | retained_intron | ||
|
ENST00000484673 (MST1-005)
|
49685885-49688673 | retained_intron | ||
|
ENST00000488350 (MST1-002)
|
49683976-49689493 | retained_intron | ||
|
ENST00000489007 (MST1-023)
|
49685745-49686803 | retained_intron | ||
|
ENST00000490966 (MST1-011)
|
49686968-49688658 | retained_intron | ||
|
ENST00000491943 (MST1-010)
|
49687813-49689501 | processed_transcript | ||
|
ENST00000492329 (MST1-009)
|
49683976-49686960 | retained_intron | ||
|
ENST00000492370 (MST1-004)
|
49686168-49688673 | retained_intron | ||
|
ENST00000493836 (MST1-014)
|
49684049-49685399 | retained_intron | ||
|
ENST00000494809 (MST1-021)
|
49685482-49686857 | retained_intron | ||
|
ENST00000494828 (MST1-024)
|
49686742-49688671 | processed_transcript | ||
|
ENST00000497359 (MST1-007)
|
49684861-49686866 | retained_intron | ||
|
ENST00000498021 (MST1-012)
|
49684844-49685874 | retained_intron | ||
|
ENSG00000173540 (GMPPB) GDP-mannose pyrophosphorylase B |
ENST00000308375 (GMPPB-002)
|
49719924-49723951 | protein_coding | |
|
ENST00000308388 (GMPPB-003)
|
49721476-49723949 | protein_coding | ||
|
ENST00000480687 (GMPPB-001)
|
49716844-49723951 | protein_coding | ||
|
ENST00000481959 (GMPPB-004)
|
49722732-49723943 | retained_intron | ||
|
ENST00000495627 (GMPPB-005)
|
49722992-49723916 | retained_intron | ||
| CIL_0005NE_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000041528-ENSMUSG00000041528 | CGP | 10090 | 9:108051534-108083346 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000032591 (Mst1) macrophage stimulating 1 (hepatocyte growth factor-like) |
ENSMUST00000035211 (Mst1-001)
|
108080436-108085027 | protein_coding | |
|
ENSMUST00000160184 (Mst1-003)
|
108080483-108082314 | nonsense_mediated_decay | ||
|
ENSMUST00000161253 (Mst1-004)
|
108084305-108084998 | processed_transcript | ||
|
ENSMUST00000162886 (Mst1-002)
|
108080454-108084995 | protein_coding | ||
|
ENSMUSG00000032593 (Amigo3) adhesion molecule with Ig like domain 3 |
ENSMUST00000085060 (Amigo3-001)
|
108053159-108055701 | protein_coding | |
|
ENSMUSG00000070284 (Gmppb) GDP-mannose pyrophosphorylase B |
ENSMUST00000047947 (Gmppb-002)
|
108049325-108051698 | protein_coding | |
|
ENSMUST00000112295 (Gmppb-001)
|
108049289-108052801 | protein_coding | ||
|
ENSMUST00000137284 (Gmppb-003)
|
108049289-108051916 | retained_intron | ||
|
ENSMUST00000145330 (Gmppb-004)
|
108049938-108051519 | processed_transcript | ||
|
ENSMUST00000150700 (Gmppb-005)
|
108049269-108049581 | processed_transcript | ||
|
ENSMUSG00000098787 (Mir7088) microRNA 7088 |
ENSMUST00000184227 (Mir7088-201)
|
108081498-108081583 | miRNA | |
Expression Patterns
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