C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-C motif) receptor 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173585 CCR9 9606 + 3:45886504-45903177 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355983 CCR9-201 45886504-45903175 protein_coding
  ENST00000357632 CCR9-001 45886504-45903177 protein_coding
  ENST00000395963 CCR9-002 45886509-45903174 protein_coding
  ENST00000422395 CCR9-003 45886549-45901898 protein_coding
  ENST00000463197 CCR9-004 45886510-45895108 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000357632ENST00000395963ENST00000422395ENST00000463197
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000357632 N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395963 N/A 0.409±0.00 N/A 0.022±0.00 N/A 0.067±0.01 0.010±0.00 0.082±0.00 N/A 0.058±0.00 0.062±0.01 0.015±0.00 0.031±0.00
ENST00000422395 0.036±0.00 N/A 0.413±0.00 0.018±0.00 0.092±0.00 N/A 0.102±0.00 0.042±0.00 0.388±0.20 0.539±0.00 0.075±0.05 0.043±0.00 N/A
ENST00000463197 N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000427 CIL_000427_0002 CGP 3:45823316-45916042

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004950 TAS chemokine receptor activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006935 IEA chemotaxis
GO:0006955 IEA immune response
GO:0006968 TAS cellular defense response
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007204 TAS positive regulation of cytosolic calcium ion concentration
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0016493 IEA C-C chemokine receptor activity
GO:0070098 IEA chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053943 ccr9b chemokine (C-C motif) receptor 9b protein_coding Danio_rerio
ENSDARG00000055186 ccr9a chemokine (C-C motif) receptor 9a protein_coding Danio_rerio
ENSDARG00000068310 ccr9b chemokine (C-C motif) receptor 9b protein_coding Danio_rerio
ENSMUSG00000029530 Ccr9 chemokine (C-C motif) receptor 9 protein_coding Mus_musculus

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