C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C-C motif) receptor 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395963 CCR9-002 ENSG00000173585 9606 + 3:45886509-45903174 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyMuscleOvaryPlacentaTestisENST00000395963
Transcript ID Adrenal Brain Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000395963 0.409±0.00 0.022±0.00 0.067±0.01 0.010±0.00 0.082±0.00 0.058±0.00 0.062±0.01 0.015±0.00 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000427 CIL_000427_0002 CGP 3:45823316-45916042

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004950 TAS chemokine receptor activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006955 IEA immune response
GO:0006968 TAS cellular defense response
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007204 TAS positive regulation of cytosolic calcium ion concentration
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0070098 IEA chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180093 Ccr9-201 protein_coding Mus_musculus 0 1127
ENSMUST00000168910 Ccr9-004 protein_coding Mus_musculus 0 1127
ENSMUST00000166236 Ccr9-001 protein_coding Mus_musculus 0 1127
ENSMUST00000163559 Ccr9-002 protein_coding Mus_musculus 0 1127
ENSMUST00000111454 Ccr9-003 protein_coding Mus_musculus 0 1120

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