C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UBX domain protein 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173960 UBXN2A 9606 + 2:23927285-24004909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309033 UBXN2A-001 23940419-24004909 protein_coding
  ENST00000404924 UBXN2A-003 23927312-24000203 protein_coding
  ENST00000446425 UBXN2A-002 23927285-24000820 processed_transcript
  ENST00000479859 UBXN2A-004 23971364-23977320 retained_intron
  ENST00000535786 UBXN2A-201 23940417-24000821 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309033ENST00000404924ENST00000446425ENST00000535786
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309033 1.296±0.00 1.997±0.00 0.198±0.00 1.096±0.43 1.101±0.78 0.960±0.63 1.861±1.42 1.518±0.00 0.437±0.01 0.524±0.16 1.239±0.66 1.087±0.44 1.340±0.69 0.992±0.42
ENST00000404924 N/A N/A 0.824±0.00 1.875±0.35 1.159±0.00 0.754±0.00 0.728±0.00 1.532±0.00 1.685±0.00 1.373±0.00 2.785±0.00 1.670±0.81 N/A 1.072±0.00
ENST00000446425 1.535±0.00 1.327±0.00 N/A N/A 1.136±0.00 1.013±0.11 1.889±0.00 1.695±0.00 1.080±0.79 0.448±0.00 N/A 0.644±0.00 1.779±0.00 1.743±0.00
ENST00000535786 1.037±0.00 1.635±0.00 0.815±0.00 0.593±0.00 1.502±0.59 1.436±0.66 N/A 1.118±0.25 1.285±0.66 2.526±0.54 2.271±0.00 1.568±1.02 3.636±1.16 1.968±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005801 IEA cis-Golgi network
GO:0005829 IEA cytosol
GO:0010468 IEA regulation of gene expression
GO:0031396 IEA regulation of protein ubiquitination
GO:0033130 IEA acetylcholine receptor binding
GO:0042176 IEA regulation of protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087180 ubxn2a UBX domain protein 2A protein_coding Danio_rerio
ENSMUSG00000020634 Ubxn2a UBX domain protein 2A protein_coding Mus_musculus

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