C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: immunoglobulin superfamily, DCC subclass, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174498 IGDCC3 9606 - 15:65327127-65378040 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327987 IGDCC3-001 65327127-65378040 protein_coding
  ENST00000558354 IGDCC3-002 65329579-65356372 protein_coding
  ENST00000559058 IGDCC3-005 65334771-65355911 protein_coding
  ENST00000559231 IGDCC3-003 65331104-65334641 processed_transcript
  ENST00000559947 IGDCC3-004 65373489-65375300 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327987ENST00000558354ENST00000559058ENST00000559947
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327987 0.009±0.00 0.024±0.00 0.058±0.00 0.320±0.00 N/A N/A N/A 0.095±0.00 N/A 0.005±0.00 N/A 0.282±0.25 4.174±2.72 0.453±0.27
ENST00000558354 N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A 0.097±0.02 N/A N/A
ENST00000559058 N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559947 0.067±0.00 0.346±0.00 N/A N/A 0.121±0.00 0.220±0.00 0.152±0.00 0.279±0.00 0.208±0.00 0.043±0.00 0.060±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0001 VISTA 15:64785331-65389080
CIL_0004TE CIL_0004TE_0002 CGP 15:65327127-65423072

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005887 IEA integral component of plasma membrane
GO:0050885 IEA neuromuscular process controlling balance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075158 igdcc3 immunoglobulin superfamily, DCC subclass, member 3 protein_coding Danio_rerio
ENSMUSG00000032394 Igdcc3 immunoglobulin superfamily, DCC subclass, member 3 protein_coding Mus_musculus

Loading