C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 2A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174640 SLCO2A1 9606 - 3:133932696-134052184 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310926 SLCO2A1-001 133932696-134030076 protein_coding
  ENST00000462770 SLCO2A1-003 133942312-134029925 retained_intron
  ENST00000464676 SLCO2A1-002 133950952-134029925 retained_intron
  ENST00000477061 SLCO2A1-006 133948654-133949216 retained_intron
  ENST00000478651 SLCO2A1-005 133955343-134029925 processed_transcript
  ENST00000478662 SLCO2A1-008 133979547-134052184 processed_transcript
  ENST00000481359 SLCO2A1-007 133934639-134029923 nonsense_mediated_decay
  ENST00000493729 SLCO2A1-004 133934611-134029914 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310926ENST00000462770ENST00000464676ENST00000477061ENST00000478651ENST00000481359ENST00000493729
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310926 9.397±0.00 21.524±0.00 1.437±0.00 0.450±0.28 1.787±0.79 7.145±0.00 1.515±1.46 17.358±17.22 0.640±0.00 59.964±0.00 0.265±0.00 2.973±1.80 27.233±17.54 4.035±0.00
ENST00000462770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.155±0.00 N/A N/A
ENST00000464676 N/A N/A 0.803±0.00 N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000477061 N/A N/A N/A 0.326±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.914±0.00 N/A N/A N/A
ENST00000481359 N/A N/A N/A N/A N/A N/A 0.057±0.00 0.378±0.00 N/A N/A N/A 0.679±0.00 4.635±0.00 N/A
ENST00000493729 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.834±0.00 0.257±0.00 N/A 8.854±0.00 0.874±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005319 TAS lipid transporter activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 IEA transport
GO:0006869 TAS lipid transport
GO:0015132 IEA prostaglandin transmembrane transporter activity
GO:0015732 IEA prostaglandin transport
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0043252 TAS sodium-independent organic anion transport
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061896 slco2a1 solute carrier organic anion transporter family, member 2A1 protein_coding Danio_rerio
ENSMUSG00000032548 Slco2a1 solute carrier organic anion transporter family, member 2a1 protein_coding Mus_musculus

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