C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 2a1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032548 Slco2a1 10090 + 9:102988712-103096002 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035148 Slco2a1-001 103008002-103090451 protein_coding
  ENSMUST00000185215 Slco2a1-003 102988712-103020775 processed_transcript
  ENSMUST00000188664 Slco2a1-002 103008499-103096002 nonsense_mediated_decay
  ENSMUST00000190892 Slco2a1-004 103008154-103011907 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035148ENSMUST00000188664ENSMUST00000190892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035148 2.021±0.70 1.363±0.11 2.150±0.89 0.216±0.11 11.174±0.80 10.265±2.93 1.033±0.26 4.576±0.98 4.626±3.25 65.635±5.14 0.266±0.12 13.015±3.54 22.025±21.53 1.521±1.15
ENSMUST00000188664 1.844±0.79 1.696±0.19 N/A N/A 10.500±2.35 12.175±3.11 0.609±0.12 3.469±0.92 6.291±2.40 59.747±17.50 N/A 15.702±2.62 26.785±27.97 0.454±0.40
ENSMUST00000190892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019J CIL_00019J_0002 CGP 9:102834917-103096002
CIL_0005UG CIL_0005UG_0002 CGP 9:102988712-103185276

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 IC integral component of plasma membrane
GO:0015132 IDA prostaglandin transmembrane transporter activity
GO:0015732 IDA prostaglandin transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061896 slco2a1 solute carrier organic anion transporter family, member 2A1 protein_coding Danio_rerio
ENSG00000174640 SLCO2A1 solute carrier organic anion transporter family, member 2A1 protein_coding Homo_sapiens

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