C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 49
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174776 WDR49 9606 - 3:167478684-167653983 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308378 WDR49-001 167478684-167653501 protein_coding
  ENST00000460448 WDR49-007 167532883-167653925 nonsense_mediated_decay
  ENST00000466760 WDR49-005 167554773-167653978 protein_coding
  ENST00000471198 WDR49-008 167627133-167653880 nonsense_mediated_decay
  ENST00000472600 WDR49-003 167478687-167620557 protein_coding
  ENST00000476376 WDR49-004 167478687-167575231 protein_coding
  ENST00000479765 WDR49-002 167478687-167653983 protein_coding
  ENST00000488012 WDR49-006 167621469-167653940 protein_coding
  ENST00000493061 WDR49-009 167522332-167531189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308378ENST00000460448ENST00000466760ENST00000471198ENST00000472600ENST00000476376ENST00000479765ENST00000488012ENST00000493061
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.00
ENST00000460448 N/A N/A N/A 0.079±0.00 N/A 0.021±0.00 N/A N/A 0.120±0.00 N/A N/A N/A
ENST00000466760 0.148±0.00 N/A N/A N/A 0.182±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000471198 N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A
ENST00000472600 N/A N/A 0.093±0.00 N/A 0.061±0.00 N/A 0.167±0.00 1.203±0.00 N/A N/A N/A 0.094±0.00
ENST00000476376 0.066±0.00 0.125±0.00 0.036±0.00 N/A 0.032±0.00 N/A N/A N/A N/A 0.025±0.00 0.017±0.00 0.175±0.00
ENST00000479765 0.019±0.00 N/A 0.116±0.00 0.086±0.06 0.045±0.00 N/A 0.207±0.00 1.647±0.00 N/A 0.123±0.00 N/A N/A
ENST00000488012 N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493061 N/A N/A N/A N/A 0.191±0.00 0.049±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZG CIL_0001ZG_0001 CGP 3:167240287-167479004

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054572 si:dkey-1m11.8 WD repeat domain 49 protein_coding Danio_rerio
ENSMUSG00000044083 Efcab8 EF-hand calcium binding domain 8 protein_coding Mus_musculus

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