C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF-hand calcium binding domain 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044083 Efcab8 10090 + 2:153780879-153844752 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000126656 Efcab8-003 153798619-153816482 protein_coding
  ENSMUST00000144827 Efcab8-002 153780879-153795182 nonsense_mediated_decay
  ENSMUST00000175856 Efcab8-001 153842981-153844752 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126656ENSMUST00000144827ENSMUST00000175856
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126656 0.222±0.08 0.122±0.06 N/A 0.039±0.00 0.113±0.05 0.102±0.00 0.042±0.01 0.028±0.00 0.054±0.02 0.036±0.00 N/A 0.053±0.02 0.110±0.07 17.070±0.00
ENSMUST00000144827 0.053±0.03 0.068±0.04 0.032±0.01 0.034±0.01 0.038±0.01 N/A 0.021±0.00 0.044±0.00 0.043±0.04 0.026±0.00 0.045±0.00 0.083±0.06 0.028±0.00 N/A
ENSMUST00000175856 0.336±0.07 0.628±0.38 0.073±0.00 0.047±0.02 0.487±0.37 0.090±0.03 0.025±0.01 0.059±0.03 0.034±0.02 0.111±0.08 0.056±0.03 0.152±0.08 0.467±0.14 9.516±4.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0002 VISTA 2:153181176-153785061
CIL_0008NQ CIL_0008NQ_0002 VISTA 2:153260290-153861940
CIL_0008QN CIL_0008QN_0002 VISTA 2:153551282-154154369

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000174776 WDR49 WD repeat domain 49 protein_coding Homo_sapiens

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