C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAH (Asp-Glu-Ala-His) box polypeptide 36
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174953 DHX36 9606 - 3:154272546-154324497 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308361 DHX36-002 154275668-154324460 protein_coding
  ENST00000329463 DHX36-003 154276171-154324416 protein_coding
  ENST00000460695 DHX36-005 154278495-154283218 retained_intron
  ENST00000460875 DHX36-011 154303344-154305337 retained_intron
  ENST00000462464 DHX36-007 154309796-154312248 retained_intron
  ENST00000469977 DHX36-008 154284653-154295327 protein_coding
  ENST00000477549 DHX36-009 154276553-154277894 retained_intron
  ENST00000479934 DHX36-013 154277625-154284987 nonsense_mediated_decay
  ENST00000481332 DHX36-012 154284781-154292578 retained_intron
  ENST00000481941 DHX36-004 154277635-154319284 protein_coding
  ENST00000491011 DHX36-006 154314651-154324251 retained_intron
  ENST00000495598 DHX36-010 154276029-154277835 retained_intron
  ENST00000496811 DHX36-001 154272546-154324497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308361ENST00000329463ENST00000460695ENST00000481941ENST00000496811
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308361 2.525±0.00 4.107±0.00 N/A 2.595±1.66 2.086±0.35 2.644±0.00 4.126±0.00 4.517±0.00 2.694±1.08 3.003±0.31 11.392±0.00 2.678±0.00 2.405±0.30 10.778±0.00
ENST00000329463 3.655±0.00 2.810±0.00 N/A 5.108±0.00 2.142±0.00 1.423±0.00 1.843±0.00 1.386±0.20 1.366±0.00 1.472±0.00 N/A 3.250±0.00 19.232±0.00 25.486±21.24
ENST00000460695 N/A 3.286±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481941 N/A N/A 0.828±0.00 3.364±0.00 2.951±0.00 2.801±0.00 0.802±0.00 2.449±0.00 N/A 4.731±0.00 0.525±0.00 2.518±0.00 N/A N/A
ENST00000496811 1.585±0.00 1.718±0.00 0.740±0.00 1.765±0.00 1.828±0.02 1.021±0.52 1.051±0.00 0.938±0.00 N/A 0.519±0.00 1.388±0.00 1.927±0.38 1.708±0.55 1.912±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066Q CIL_00066Q_0001 CGP 3:154121003-154324497
CIL_00066D CIL_00066D_0001 CGP 3:154272546-154429715

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000781 IEA chromosome, telomeric region
GO:0001047 IDA core promoter binding
GO:0001503 ISS ossification
GO:0002151 IMP G-quadruplex RNA binding
GO:0003676 IEA nucleic acid binding
GO:0003725 IDA double-stranded RNA binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0006200 IEA ATP catabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0008026 IEA ATP-dependent helicase activity
GO:0008094 IDA DNA-dependent ATPase activity
GO:0008152 IEA metabolic process
GO:0009615 IEA response to virus
GO:0010501 IDA RNA secondary structure unwinding
GO:0032206 IMP positive regulation of telomere maintenance
GO:0032481 TAS positive regulation of type I interferon production
GO:0042826 ISS histone deacetylase binding
GO:0043330 IEA response to exogenous dsRNA
GO:0044212 ISS transcription regulatory region DNA binding
GO:0044822 IDA poly(A) RNA binding
GO:0045087 TAS innate immune response
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0051880 IDA G-quadruplex DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061922 DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 protein_coding Danio_rerio
ENSMUSG00000027770 Dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 protein_coding Mus_musculus

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