C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308361 DHX36-002 ENSG00000174953 9606 - 3:154275668-154324460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308361
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308361 2.525±0.00 4.107±0.00 2.595±1.66 2.086±0.35 2.644±0.00 4.126±0.00 4.517±0.00 2.694±1.08 3.003±0.31 11.392±0.00 2.678±0.00 2.405±0.30 10.778±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066Q CIL_00066Q_0001 CGP 3:154121003-154324497
CIL_00066D CIL_00066D_0001 CGP 3:154272546-154429715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000781 IEA chromosome, telomeric region
GO:0001047 IDA core promoter binding
GO:0001503 ISS ossification
GO:0002151 IMP G-quadruplex RNA binding
GO:0003676 IEA nucleic acid binding
GO:0003725 IDA double-stranded RNA binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0006200 IEA ATP catabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0008026 IEA ATP-dependent helicase activity
GO:0008094 IDA DNA-dependent ATPase activity
GO:0010501 IDA RNA secondary structure unwinding
GO:0032206 IMP positive regulation of telomere maintenance
GO:0032481 TAS positive regulation of type I interferon production
GO:0042826 ISS histone deacetylase binding
GO:0044212 ISS transcription regulatory region DNA binding
GO:0044822 IDA poly(A) RNA binding
GO:0045087 TAS innate immune response
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0051880 IDA G-quadruplex DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029336 Dhx36-001 protein_coding Mus_musculus 0 2577
ENSMUST00000160858 Dhx36-003 retained_intron Mus_musculus 0 477
ENSMUST00000162070 Dhx36-002 retained_intron Mus_musculus 0 401

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