C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbonic anhydrase VA, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174990 CA5A 9606 - 16:87881546-87936529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309893 CA5A-001 87881546-87936516 protein_coding
  ENST00000566402 CA5A-003 87888018-87892268 retained_intron
  ENST00000568801 CA5A-002 87925539-87936529 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000309893ENST00000566402ENST00000568801
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000309893 0.155±0.00 0.465±0.00 0.129±0.11 0.106±0.10 0.120±0.00 0.058±0.05 0.203±0.00 0.298±0.00 0.138±0.00 0.065±0.00 0.038±0.02 0.131±0.04
ENST00000566402 N/A N/A N/A N/A N/A N/A 2.785±0.00 4.045±0.00 N/A N/A 0.053±0.00 N/A
ENST00000568801 N/A N/A N/A N/A N/A N/A N/A 8.942±0.00 N/A 0.170±0.00 0.154±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SX CIL_0002SX_0001 CGP 16:87830023-87936529
CIL_0002SY CIL_0002SY_0001 CGP 16:87881546-88118422

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004089 IEA carbonate dehydratase activity
GO:0005739 TAS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006730 IEA one-carbon metabolic process
GO:0008270 IEA zinc ion binding
GO:0015701 TAS bicarbonate transport
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051884 ca5 carbonic anhydrase V protein_coding Danio_rerio
ENSMUSG00000025317 Car5a carbonic anhydrase 5a, mitochondrial protein_coding Mus_musculus

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