C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: desmoglein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175065 DSG4 9606 + 18:31376777-31414912 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308128 DSG4-001 31376777-31413916 protein_coding
  ENST00000359747 DSG4-002 31376883-31414912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartOvaryPlacentaTestisENST00000308128ENST00000359747
Transcript ID Brain Breast Heart Ovary Placenta Testis
ENST00000308128 0.014±0.00 0.089±0.00 0.006±0.00 N/A N/A 0.174±0.00
ENST00000359747 N/A 0.020±0.01 N/A 0.016±0.00 0.008±0.00 0.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EL CIL_0006EL_0001 CGP 18:31318089-31414912
CIL_0006PJ CIL_0006PJ_0001 CGP 18:31376777-31478702

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001942 IEA hair follicle development
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030057 IEA desmosome
GO:0030216 IEA keratinocyte differentiation
GO:0030509 IEA BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039665 CABZ01055869.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000062750 si:ch73-74h11.1 si:ch73-74h11.1 protein_coding Danio_rerio
ENSDARG00000076426 dsg2l desmoglein 2 like protein_coding Danio_rerio
ENSMUSG00000001804 Dsg4 desmoglein 4 protein_coding Mus_musculus

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