C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: desmoglein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359747 DSG4-002 ENSG00000175065 9606 + 18:31376883-31414912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryPlacentaTestisENST00000359747
Transcript ID Breast Ovary Placenta Testis
ENST00000359747 0.020±0.01 0.016±0.00 0.008±0.00 0.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EL CIL_0006EL_0001 CGP 18:31318089-31414912
CIL_0006PJ CIL_0006PJ_0001 CGP 18:31376777-31478702

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IEA hair follicle development
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030057 IEA desmosome
GO:0030216 IEA keratinocyte differentiation
GO:0030509 IEA BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019426 Dsg4-001 protein_coding Mus_musculus 0 1864

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