C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 1 open reading frame 127
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175262 C1orf127 9606 - 1:10946471-10982037 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000377004 C1orf127-201 10946473-10982037 protein_coding
  ENST00000418570 C1orf127-001 10946473-10964201 protein_coding
  ENST00000468348 C1orf127-003 10946475-10947870 protein_coding
  ENST00000476357 C1orf127-002 10946471-10949751 retained_intron
  ENST00000520253 C1orf127-004 10946730-10976215 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377004ENST00000418570ENST00000468348ENST00000476357ENST00000520253
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377004 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A
ENST00000418570 N/A N/A 0.036±0.00 0.173±0.00 N/A 0.083±0.00 N/A N/A 0.015±0.00 1.161±0.74 0.198±0.00 0.242±0.00 0.460±0.06
ENST00000468348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.679±0.00 0.221±0.01 N/A
ENST00000476357 0.039±0.00 0.149±0.00 0.125±0.00 0.142±0.00 0.021±0.00 0.058±0.01 0.055±0.00 0.066±0.00 0.051±0.00 0.472±0.02 0.137±0.12 N/A 0.075±0.00
ENST00000520253 N/A 0.048±0.00 N/A N/A N/A 0.101±0.00 N/A N/A 0.061±0.00 N/A 0.212±0.00 0.149±0.10 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WE CIL_0007WE_0001 VISTA 1:10372013-10973061
CIL_00085P CIL_00085P_0001 VISTA 1:10397607-10998574
CIL_00082Y CIL_00082Y_0001 VISTA 1:10421182-11021687
CIL_0008S2 CIL_0008S2_0001 VISTA 1:10435049-11039184
CIL_0008RU CIL_0008RU_0001 VISTA 1:10491513-11092116
CIL_0008JG CIL_0008JG_0001 VISTA 1:10565145-11165671
CIL_0008JY CIL_0008JY_0001 VISTA 1:10605072-11206087
CIL_00019Q CIL_00019Q_0002 CGP 1:10636604-10982037
CIL_00019T CIL_00019T_0002 CGP 1:10946471-11026420

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000098029 C23H1orf127 chromosome 1 open reading frame 127 protein_coding Danio_rerio
ENSMUSG00000070577 Gm572 predicted gene 572 protein_coding Mus_musculus

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