C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apolipoprotein F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175336 APOF 9606 - 12:56360569-56362823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398189 APOF-001 56360569-56362823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryTestisENST00000398189
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Testis
ENST00000398189 0.008±0.00 0.147±0.00 0.163±0.01 0.116±0.06 0.016±0.00 39.154±39.15 64.772±64.68 0.070±0.00 0.014±0.00 0.220±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TG CIL_0002TG_0002 CGP 12:56341597-56362823

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005319 TAS lipid transporter activity
GO:0005576 NAS extracellular region
GO:0006629 TAS lipid metabolic process
GO:0006641 IEA triglyceride metabolic process
GO:0006869 TAS lipid transport
GO:0008203 IEA cholesterol metabolic process
GO:0015485 TAS cholesterol binding
GO:0033344 IEA cholesterol efflux
GO:0034362 IEA low-density lipoprotein particle
GO:0034364 IEA high-density lipoprotein particle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090980 apof apolipoprotein F protein_coding Danio_rerio
ENSMUSG00000047631 Apof apolipoprotein F protein_coding Mus_musculus

Loading