C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002TG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031647-ENSDARG00000090980 CGP 7955 6:39054408-39098596
GeneTranscriptPositionBiotype
ENSDARG00000031647 (stat2)
signal transducer and activator of transcription 2 		ENSDART00000050682 (stat2-201) 39054510-39089817 protein_coding
ENSDART00000148650 (stat2-002) 39081838-39082353 retained_intron
ENSDART00000148661 (stat2-001) 39054408-39091286 protein_coding
ENSDARG00000090980 (apof)
apolipoprotein F 		ENSDART00000122710 (apof-201) 39094320-39095498 protein_coding
ENSDART00000153626 (apof-001) 39093158-39098596 protein_coding
CIL_0002TG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170581-ENSG00000175336 CGP 9606 12:56341597-56362823
GeneTranscriptPositionBiotype
ENSG00000170581 (STAT2)
signal transducer and activator of transcription 2, 113kDa 		ENST00000314128 (STAT2-002) 56342710-56360074 protein_coding
ENST00000418572 (STAT2-004) 56348998-56360126 protein_coding
ENST00000555488 (STAT2-014) 56344085-56346868 retained_intron
ENST00000555519 (STAT2-011) 56349501-56354507 retained_intron
ENST00000555646 (STAT2-009) 56355273-56360107 nonsense_mediated_decay
ENST00000556140 (STAT2-005) 56351177-56360137 retained_intron
ENST00000556539 (STAT2-008) 56341597-56349775 processed_transcript
ENST00000557156 (STAT2-010) 56351203-56354872 processed_transcript
ENST00000557199 (STAT2-013) 56346678-56348912 retained_intron
ENST00000557235 (STAT2-001) 56342936-56360126 protein_coding
ENST00000557252 (STAT2-012) 56349860-56351181 processed_transcript
ENST00000557417 (STAT2-006) 56354555-56360155 retained_intron
ENSG00000175336 (APOF)
apolipoprotein F 		ENST00000398189 (APOF-001) 56360569-56362823 protein_coding
ENSG00000252206 (RNU7-40P)
RNA, U7 small nuclear 40 pseudogene 		ENST00000516397 (RNU7-40P-201) 56352387-56352450 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TG_0001ENSDARG00000031647ENSDART00000050682ENSDART00000148650ENSDART00000148661ENSDARG00000090980ENSDART00000122710ENSDART00000153626CIL_0002TG_0002ENSG00000170581ENST00000314128ENST00000418572ENST00000555488ENST00000555519ENST00000555646ENST00000556140ENST00000556539ENST00000557156ENST00000557199ENST00000557235ENST00000557252ENST00000557417ENSG00000175336ENST00000398189ENSG00000252206ENST00000516397
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TG_0001ENSDARG00000031647ENSDART00000050682ENSDART00000148661ENSDARG00000090980ENSDART00000122710ENSDART00000153626CIL_0002TG_0002ENSG00000170581ENST00000314128ENST00000418572ENST00000555519ENST00000556140ENST00000556539ENST00000557235ENST00000557417ENSG00000175336ENST00000398189ENSG00000252206ENST00000516397
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031647 ENSDART00000050682 N/A N/A N/A 5.763±0.00 N/A N/A 8.407±3.06 10.211±0.00 0.386±0.00 N/A 0.772±0.00 N/A N/A N/A
ENSDART00000148650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148661 N/A N/A N/A 3.364±1.31 N/A N/A 5.175±3.42 17.616±10.53 N/A N/A 2.863±0.00 N/A N/A N/A
ENSDARG00000090980 ENSDART00000122710 N/A N/A N/A N/A N/A N/A N/A N/A 3.232±0.00 N/A N/A N/A N/A N/A
ENSDART00000153626 N/A N/A N/A 25.827±5.47 N/A N/A 8.770±4.58 4.762±1.71 5.875±0.00 N/A 8.605±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170581 ENST00000314128 7.107±0.00 N/A 2.190±0.00 3.103±1.57 5.042±1.38 0.925±0.00 1.096±0.00 2.946±0.00 1.701±0.00 3.060±0.60 0.679±0.00 5.400±2.81 6.261±0.00 3.093±1.05
ENST00000418572 N/A N/A N/A N/A N/A N/A 0.643±0.00 N/A N/A 5.268±0.00 N/A N/A N/A N/A
ENST00000555488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.710±0.00
ENST00000555646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556140 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.294±0.00 N/A N/A N/A N/A
ENST00000556539 4.734±0.00 3.037±0.00 1.177±0.00 2.172±0.43 9.397±3.42 3.817±0.00 1.736±0.00 4.655±2.05 8.690±0.00 5.753±2.48 1.273±0.22 21.293±6.83 7.464±3.48 8.526±0.00
ENST00000557156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557235 N/A N/A N/A 1.158±0.00 N/A 1.161±0.00 N/A 3.828±0.00 N/A N/A N/A 1.410±0.00 N/A N/A
ENST00000557252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557417 N/A N/A N/A N/A 6.641±0.00 4.086±0.00 1.235±0.00 N/A 3.837±0.00 N/A 1.615±0.00 3.827±0.00 N/A N/A
ENSG00000175336 ENST00000398189 0.008±0.00 0.147±0.00 N/A 0.163±0.01 0.116±0.06 N/A 0.016±0.00 39.154±39.15 64.772±64.68 0.070±0.00 N/A 0.014±0.00 N/A 0.220±0.07
ENSG00000252206 ENST00000516397 0.573±0.00 2.773±0.00 N/A 1.732±0.00 4.866±0.00 N/A 0.534±0.00 N/A N/A N/A N/A N/A N/A N/A

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