C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline rich membrane anchor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175785 PRIMA1 9606 - 14:93718298-93788481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316227 PRIMA1-201 93721038-93787759 protein_coding
  ENST00000393140 PRIMA1-001 93718298-93788481 protein_coding
  ENST00000393143 PRIMA1-202 93718298-93787759 protein_coding
  ENST00000477603 PRIMA1-002 93721038-93788420 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316227ENST00000393140ENST00000393143
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.912±0.00
ENST00000393140 N/A N/A N/A N/A N/A 2.923±0.00 N/A N/A N/A N/A N/A 0.932±0.92 N/A N/A
ENST00000393143 0.819±0.00 0.457±0.00 0.036±0.00 3.226±0.00 0.749±0.01 4.043±3.66 0.818±0.67 0.852±0.00 0.223±0.00 0.194±0.09 0.337±0.05 1.278±0.87 1.643±0.24 3.453±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BG CIL_0000BG_0001 CGP 14:93718298-93929608

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0019899 IEA enzyme binding
GO:0030054 IEA cell junction
GO:0031226 IEA intrinsic component of plasma membrane
GO:0042135 IEA neurotransmitter catabolic process
GO:0043495 IEA protein anchor
GO:0045202 IEA synapse
GO:0051649 IEA establishment of localization in cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077377 PRIMA1 proline rich membrane anchor 1 protein_coding Danio_rerio
ENSMUSG00000041669 Prima1 proline rich membrane anchor 1 protein_coding Mus_musculus

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