C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 57
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176155 CCDC57 9606 - 17:82101460-82212830 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327026 CCDC57-003 82153610-82185172 processed_transcript
  ENST00000389641 CCDC57-001 82101470-82212813 protein_coding
  ENST00000392343 CCDC57-002 82157448-82212813 protein_coding
  ENST00000392345 CCDC57-008 82101690-82128556 protein_coding
  ENST00000392346 CCDC57-004 82111986-82152299 protein_coding
  ENST00000392347 CCDC57-201 82101470-82212813 protein_coding
  ENST00000419322 CCDC57-005 82111986-82171732 protein_coding
  ENST00000475635 CCDC57-006 82155917-82156940 processed_transcript
  ENST00000483145 CCDC57-007 82127705-82134343 processed_transcript
  ENST00000577530 CCDC57-017 82163217-82175664 processed_transcript
  ENST00000578187 CCDC57-011 82188224-82194255 retained_intron
  ENST00000578910 CCDC57-009 82188225-82198428 retained_intron
  ENST00000581625 CCDC57-010 82188350-82198422 nonsense_mediated_decay
  ENST00000582040 CCDC57-018 82135112-82151606 processed_transcript
  ENST00000582100 CCDC57-013 82104795-82106587 processed_transcript
  ENST00000582885 CCDC57-016 82207563-82212830 processed_transcript
  ENST00000583053 CCDC57-015 82101470-82101850 protein_coding
  ENST00000583593 CCDC57-012 82101752-82127818 nonsense_mediated_decay
  ENST00000584717 CCDC57-014 82101460-82106375 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327026ENST00000389641ENST00000392343ENST00000392346ENST00000392347ENST00000419322ENST00000578910ENST00000584717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327026 0.318±0.00 1.871±0.00 N/A N/A 0.754±0.00 N/A 0.308±0.00 0.803±0.32 0.361±0.00 N/A 0.159±0.00 2.477±0.00 0.841±0.16 5.957±0.00
ENST00000389641 0.436±0.00 N/A 0.745±0.00 0.890±0.00 N/A 0.481±0.00 0.268±0.00 N/A N/A 0.890±0.00 0.356±0.00 N/A N/A 1.001±0.00
ENST00000392343 N/A N/A N/A N/A 0.961±0.00 N/A N/A N/A N/A 0.682±0.00 N/A 0.894±0.00 N/A N/A
ENST00000392346 0.448±0.00 1.845±0.00 N/A 0.752±0.00 1.098±0.00 0.345±0.00 0.212±0.00 N/A 0.507±0.00 N/A N/A N/A N/A N/A
ENST00000392347 0.436±0.00 N/A 0.745±0.00 0.890±0.00 N/A 0.481±0.00 0.268±0.00 N/A N/A 0.890±0.00 0.356±0.00 N/A N/A 1.001±0.00
ENST00000419322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.850±0.00
ENST00000578910 N/A N/A 4.486±0.00 N/A N/A N/A N/A N/A N/A 3.913±0.00 N/A N/A N/A N/A
ENST00000584717 3.640±0.00 18.688±0.00 N/A N/A 12.331±0.00 4.249±0.00 N/A N/A 6.773±0.00 7.351±0.00 2.423±0.00 N/A 23.390±1.36 8.146±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043S CIL_00043S_0002 CGP 17:82078338-82212830
CIL_00019I CIL_00019I_0001 CGP 17:82101460-82261129

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071314 CCDC57 (1 of 2) coiled-coil domain containing 57 protein_coding Danio_rerio
ENSDARG00000089863 CCDC57 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000048445 Ccdc57 coiled-coil domain containing 57 protein_coding Mus_musculus

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