C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: high mobility group box 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176256 HMGB4 9606 + 1:33860475-33864791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000425537 HMGB4-003 33864077-33864791 processed_transcript
  ENST00000458277 HMGB4-002 33862181-33863463 processed_transcript
  ENST00000519684 HMGB4-001 33860475-33864791 protein_coding
  ENST00000522796 HMGB4-004 33860500-33864791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverMuscleTestisENST00000425537ENST00000519684
Transcript ID Adipose Adrenal Brain Breast Liver Muscle Testis
ENST00000425537 0.173±0.00 0.508±0.00 0.028±0.00 N/A N/A N/A 276.358±23.67
ENST00000519684 N/A N/A 0.031±0.00 0.055±0.00 0.021±0.00 0.290±0.00 8.998±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N2 CIL_0001N2_0001 CGP 1:33513999-34165842

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000048686 Hmgb4 high-mobility group box 4 protein_coding Mus_musculus

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