C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member G1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176273 SLC35G1 9606 + 10:93893973-93956062 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371408 SLC35G1-001 93893973-93903824 protein_coding
  ENST00000427197 SLC35G1-201 93893973-93902733 protein_coding
  ENST00000483386 SLC35G1-002 93893991-93909830 nonsense_mediated_decay
  ENST00000494992 SLC35G1-003 93894002-93956062 nonsense_mediated_decay
  ENST00000603665 SLC35G1-004 93894022-93909825 nonsense_mediated_decay
  ENST00000605679 SLC35G1-005 93894001-93954256 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371408ENST00000427197ENST00000483386ENST00000603665
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371408 0.142±0.00 N/A N/A 0.099±0.00 0.369±0.00 0.500±0.41 0.078±0.00 0.238±0.00 0.094±0.04 0.079±0.05 0.136±0.00 0.474±0.00 0.161±0.04 N/A
ENST00000427197 0.296±0.00 0.218±0.00 0.210±0.00 N/A 0.645±0.04 1.276±1.10 0.177±0.01 0.493±0.00 0.307±0.16 0.184±0.00 N/A 0.760±0.66 0.216±0.13 1.838±0.40
ENST00000483386 0.107±0.00 0.308±0.00 0.113±0.00 0.589±0.00 0.596±0.13 0.589±0.00 0.086±0.00 N/A 0.131±0.07 0.286±0.00 0.058±0.00 0.424±0.19 0.159±0.10 1.009±0.52
ENST00000603665 0.310±0.00 0.191±0.00 0.136±0.00 N/A 0.459±0.00 N/A N/A 0.383±0.00 0.039±0.00 0.204±0.08 N/A 0.608±0.00 0.163±0.07 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067L CIL_00067L_0001 CGP 10:93757885-93956062
CIL_00067K CIL_00067K_0001 CGP 10:93893973-94332823

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0051480 IMP cytosolic calcium ion homeostasis
GO:1990034 IMP calcium ion export from cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063268 SLC35G1 solute carrier family 35, member G1 protein_coding Danio_rerio
ENSMUSG00000044026 Slc35g1 solute carrier family 35, member G1 protein_coding Mus_musculus

Loading