C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulating synaptic membrane exocytosis 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176406 RIMS2 9606 + 8:103500748-104256094 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262231 RIMS2-004 103819260-104251859 protein_coding
  ENST00000339750 RIMS2-201 104223335-104254425 protein_coding
  ENST00000395361 RIMS2-012 103766227-103768501 processed_transcript
  ENST00000406091 RIMS2-202 103880417-104251859 protein_coding
  ENST00000408894 RIMS2-006 103819387-104251070 protein_coding
  ENST00000436393 RIMS2-007 103880417-104251859 protein_coding
  ENST00000501515 RIMS2-011 103915513-103920998 processed_transcript
  ENST00000504942 RIMS2-001 103500748-104014615 protein_coding
  ENST00000507677 RIMS2-008 103912132-103976259 retained_intron
  ENST00000507740 RIMS2-005 103819272-104256094 protein_coding
  ENST00000511046 RIMS2-009 103915513-103922008 retained_intron
  ENST00000512598 RIMS2-010 103915513-103918653 retained_intron
  ENST00000515551 RIMS2-003 103819220-103942846 protein_coding
  ENST00000522174 RIMS2-016 103819554-103885808 processed_transcript
  ENST00000523362 RIMS2-013 104223364-104251736 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000262231ENST00000339750ENST00000395361ENST00000408894ENST00000436393ENST00000501515ENST00000504942ENST00000507677ENST00000507740ENST00000515551ENST00000522174ENST00000523362
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000262231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.444±0.22
ENST00000339750 0.028±0.00 0.017±0.00 N/A 3.791±0.00 0.015±0.00 0.159±0.00 N/A 0.068±0.00 0.010±0.00 0.019±0.00 0.562±0.49 0.057±0.01 0.873±0.00
ENST00000395361 N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A
ENST00000408894 N/A N/A N/A 5.593±0.00 N/A N/A N/A 0.053±0.00 0.207±0.00 N/A N/A N/A N/A
ENST00000436393 N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.680±0.29
ENST00000501515 N/A 0.352±0.00 0.429±0.00 N/A 0.085±0.00 N/A N/A N/A 0.187±0.00 0.080±0.00 1.091±0.97 0.123±0.00 N/A
ENST00000504942 N/A N/A 0.059±0.00 5.918±0.00 N/A 0.079±0.00 0.018±0.01 0.085±0.00 N/A N/A 0.209±0.00 N/A 0.334±0.00
ENST00000507677 N/A N/A N/A N/A 0.258±0.00 N/A 0.028±0.00 N/A 0.247±0.13 N/A N/A N/A N/A
ENST00000507740 N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.103±0.00 N/A N/A
ENST00000515551 N/A N/A N/A 7.364±0.00 N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A
ENST00000522174 N/A N/A 0.826±0.00 N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A
ENST00000523362 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060F CIL_00060F_0001 CGP 8:103414714-104256094

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0017137 IEA Rab GTPase binding
GO:0017156 IEA calcium ion-dependent exocytosis
GO:0017157 IEA regulation of exocytosis
GO:0019904 IEA protein domain specific binding
GO:0019933 IEA cAMP-mediated signaling
GO:0030073 IEA insulin secretion
GO:0042391 IEA regulation of membrane potential
GO:0043234 IEA protein complex
GO:0044325 IEA ion channel binding
GO:0045202 IEA synapse
GO:0046872 IEA metal ion binding
GO:0046982 IEA protein heterodimerization activity
GO:0048791 IEA calcium ion-dependent exocytosis of neurotransmitter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019622 rims2a regulating synaptic membrane exocytosis 2a protein_coding Danio_rerio
ENSDARG00000035994 rims2b regulating synaptic membrane exocytosis 2b protein_coding Danio_rerio
ENSMUSG00000037386 Rims2 regulating synaptic membrane exocytosis 2 protein_coding Mus_musculus

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