C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00060F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164934-ENSG00000176406 CGP 9606 8:103414714-104256094
GeneTranscriptPositionBiotype
ENSG00000164933 (SLC25A32)
solute carrier family 25 (mitochondrial folate carrier), member 32 		ENST00000297578 (SLC25A32-003) 103398635-103415104 protein_coding
ENST00000521645 (SLC25A32-006) 103398635-103415189 nonsense_mediated_decay
ENST00000523256 (SLC25A32-009) 103398635-103415171 nonsense_mediated_decay
ENST00000523701 (SLC25A32-005) 103401487-103402703 processed_transcript
ENST00000523866 (SLC25A32-007) 103400058-103415069 nonsense_mediated_decay
ENSG00000176406 (RIMS2)
regulating synaptic membrane exocytosis 2 		ENST00000262231 (RIMS2-004) 103819260-104251859 protein_coding
ENST00000339750 (RIMS2-201) 104223335-104254425 protein_coding
ENST00000395361 (RIMS2-012) 103766227-103768501 processed_transcript
ENST00000406091 (RIMS2-202) 103880417-104251859 protein_coding
ENST00000408894 (RIMS2-006) 103819387-104251070 protein_coding
ENST00000436393 (RIMS2-007) 103880417-104251859 protein_coding
ENST00000501515 (RIMS2-011) 103915513-103920998 processed_transcript
ENST00000504942 (RIMS2-001) 103500748-104014615 protein_coding
ENST00000507677 (RIMS2-008) 103912132-103976259 retained_intron
ENST00000507740 (RIMS2-005) 103819272-104256094 protein_coding
ENST00000511046 (RIMS2-009) 103915513-103922008 retained_intron
ENST00000512598 (RIMS2-010) 103915513-103918653 retained_intron
ENST00000515551 (RIMS2-003) 103819220-103942846 protein_coding
ENST00000522174 (RIMS2-016) 103819554-103885808 processed_transcript
ENST00000523362 (RIMS2-013) 104223364-104251736 protein_coding
ENSG00000216113 (AP001572.1)
 ENST00000401294 (AP001572.1-201) 103851599-103851688 miRNA
ENSG00000239344 (RP11-771F20.1)
 ENST00000481577 (RP11-771F20.1-001) 103768281-103769029 processed_pseudogene
ENSG00000253477 (RP11-1C8.4)
 ENST00000517376 (RP11-1C8.4-001) 103483398-103499220 antisense
ENST00000523422 (RP11-1C8.4-002) 103483423-103501676 antisense
ENSG00000255105 (RP11-5A11.1)
 ENST00000534173 (RP11-5A11.1-001) 103559099-103559389 processed_pseudogene
ENSG00000261670 (RP11-1C8.5)
 ENST00000562917 (RP11-1C8.5-001) 103464389-103468985 lincRNA
ENSG00000271830 (RP11-1C8.7)
 ENST00000606457 (RP11-1C8.7-001) 103481266-103481619 lincRNA
CIL_00060F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022300-ENSMUSG00000037386 CGP 10090 15:39112865-39681940
GeneTranscriptPositionBiotype
ENSMUSG00000022300 (Dcaf13)
DDB1 and CUL4 associated factor 13 		ENSMUST00000022909 (Dcaf13-001) 39112865-39146856 protein_coding
ENSMUSG00000037386 (Rims2)
regulating synaptic membrane exocytosis 2 		ENSMUST00000042917 (Rims2-201) 39198363-39681764 protein_coding
ENSMUST00000082054 (Rims2-202) 39198332-39681940 protein_coding
ENSMUSG00000084562 (n-R5s39)
nuclear encoded rRNA 5S 39 		ENSMUST00000122613 (n-R5s39-201) 39146380-39146487 rRNA
ENSMUSG00000098021 (Gm9522)
predicted gene 9522 		ENSMUST00000182394 (Gm9522-001) 39180511-39181441 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060F_0001ENSG00000164933ENST00000297578ENST00000521645ENST00000523256ENST00000523701ENST00000523866ENSG00000176406ENST00000262231ENST00000339750ENST00000395361ENST00000406091ENST00000408894ENST00000436393ENST00000501515ENST00000504942ENST00000507677ENST00000507740ENST00000511046ENST00000512598ENST00000515551ENST00000522174ENST00000523362ENSG00000216113ENST00000401294ENSG00000239344ENST00000481577ENSG00000253477ENST00000517376ENST00000523422ENSG00000255105ENST00000534173ENSG00000261670ENST00000562917ENSG00000271830ENST00000606457CIL_00060F_0002ENSMUSG00000022300ENSMUST00000022909ENSMUSG00000037386ENSMUST00000042917ENSMUST00000082054ENSMUSG00000084562ENSMUST00000122613ENSMUSG00000098021ENSMUST00000182394
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060F_0001ENSG00000164933ENST00000297578ENST00000521645ENST00000523701ENST00000523866ENSG00000176406ENST00000262231ENST00000339750ENST00000395361ENST00000408894ENST00000436393ENST00000501515ENST00000504942ENST00000507677ENST00000507740ENST00000515551ENST00000522174ENST00000523362ENSG00000216113ENST00000401294ENSG00000239344ENST00000481577ENSG00000253477ENST00000517376ENST00000523422ENSG00000255105ENST00000534173ENSG00000261670ENST00000562917ENSG00000271830ENST00000606457CIL_00060F_0002ENSMUSG00000022300ENSMUST00000022909ENSMUSG00000037386ENSMUST00000042917ENSMUST00000082054ENSMUSG00000084562ENSMUST00000122613ENSMUSG00000098021ENSMUST00000182394
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164933 ENST00000297578 6.251±0.00 5.693±0.00 N/A 3.675±1.45 5.112±0.00 2.900±0.39 3.540±0.00 5.973±0.00 4.746±0.29 3.823±0.91 2.580±1.02 7.594±0.18 3.321±0.66 7.312±0.31
ENST00000521645 N/A N/A 1.642±0.00 N/A N/A N/A 1.050±0.00 2.595±0.00 N/A N/A N/A N/A N/A N/A
ENST00000523256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523701 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.093±0.00 N/A N/A N/A N/A
ENST00000523866 8.293±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176406 ENST00000262231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.444±0.22
ENST00000339750 0.028±0.00 0.017±0.00 N/A 3.791±0.00 0.015±0.00 0.159±0.00 N/A 0.068±0.00 0.010±0.00 0.019±0.00 N/A 0.562±0.49 0.057±0.01 0.873±0.00
ENST00000395361 N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000406091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000408894 N/A N/A N/A 5.593±0.00 N/A N/A N/A 0.053±0.00 0.207±0.00 N/A N/A N/A N/A N/A
ENST00000436393 N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.680±0.29
ENST00000501515 N/A 0.352±0.00 0.429±0.00 N/A 0.085±0.00 N/A N/A N/A 0.187±0.00 0.080±0.00 N/A 1.091±0.97 0.123±0.00 N/A
ENST00000504942 N/A N/A 0.059±0.00 5.918±0.00 N/A 0.079±0.00 0.018±0.01 0.085±0.00 N/A N/A N/A 0.209±0.00 N/A 0.334±0.00
ENST00000507677 N/A N/A N/A N/A 0.258±0.00 N/A 0.028±0.00 N/A 0.247±0.13 N/A N/A N/A N/A N/A
ENST00000507740 N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A 0.103±0.00 N/A N/A
ENST00000511046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515551 N/A N/A N/A 7.364±0.00 N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A
ENST00000522174 N/A N/A 0.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A
ENST00000523362 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A N/A N/A
ENSG00000216113 ENST00000401294 N/A N/A N/A 0.464±0.00 N/A 0.212±0.00 N/A 0.440±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000239344 ENST00000481577 0.113±0.00 0.146±0.00 N/A N/A 0.226±0.00 0.371±0.00 0.032±0.00 0.265±0.00 N/A 0.082±0.00 0.172±0.00 N/A N/A N/A
ENSG00000253477 ENST00000517376 0.047±0.00 0.243±0.00 N/A 0.220±0.18 0.149±0.00 0.366±0.00 0.044±0.00 0.148±0.00 0.809±0.00 0.022±0.00 N/A 0.058±0.00 0.043±0.00 0.734±0.43
ENST00000523422 N/A N/A N/A 0.733±0.00 N/A N/A N/A N/A N/A N/A 0.108±0.00 0.148±0.00 N/A N/A
ENSG00000255105 ENST00000534173 N/A N/A N/A N/A N/A N/A N/A N/A 0.464±0.00 N/A N/A N/A N/A 0.140±0.00
ENSG00000261670 ENST00000562917 0.074±0.00 0.174±0.00 0.125±0.00 0.114±0.01 0.117±0.00 0.085±0.00 0.059±0.00 0.047±0.03 0.066±0.00 0.066±0.01 0.033±0.00 0.032±0.03 0.074±0.00 0.122±0.01
ENSG00000271830 ENST00000606457 N/A N/A N/A 1.433±1.12 N/A N/A N/A N/A N/A N/A N/A 0.182±0.00 N/A 1.561±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022300 ENSMUST00000022909 3.384±0.29 1.267±0.32 13.332±0.13 14.147±0.72 2.061±0.69 2.780±0.51 2.260±0.59 3.555±1.71 8.857±6.77 3.260±1.46 5.434±0.43 7.258±8.44 21.309±7.55 4.235±3.20
ENSMUSG00000037386 ENSMUST00000042917 N/A 0.387±0.02 N/A 12.220±8.31 0.105±0.00 N/A 0.024±0.01 N/A 0.030±0.01 0.057±0.00 0.004±0.00 0.144±0.01 0.067±0.05 0.692±0.00
ENSMUST00000082054 0.128±0.00 0.620±0.16 N/A 7.714±6.17 0.044±0.00 0.149±0.04 0.043±0.00 0.084±0.05 0.039±0.03 0.078±0.01 0.007±0.00 0.381±0.15 0.065±0.02 0.779±0.14
ENSMUSG00000084562 ENSMUST00000122613 N/A N/A 89.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.393±0.00 N/A
ENSMUSG00000098021 ENSMUST00000182394 1.355±0.94 0.550±0.38 0.440±0.13 0.253±0.20 0.063±0.03 0.376±0.18 0.168±0.02 0.050±0.03 1.553±1.22 0.921±0.80 1.305±0.71 0.860±0.59 0.733±0.47 0.170±0.11

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