C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00060F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164934-ENSG00000176406 CGP 9606 8:103414714-104256094
GeneTranscriptPositionBiotype
ENSG00000164933 (SLC25A32)
solute carrier family 25 (mitochondrial folate carrier), member 32 		ENST00000297578 (SLC25A32-003) 103398635-103415104 protein_coding
ENST00000521645 (SLC25A32-006) 103398635-103415189 nonsense_mediated_decay
ENST00000523256 (SLC25A32-009) 103398635-103415171 nonsense_mediated_decay
ENST00000523701 (SLC25A32-005) 103401487-103402703 processed_transcript
ENST00000523866 (SLC25A32-007) 103400058-103415069 nonsense_mediated_decay
ENSG00000176406 (RIMS2)
regulating synaptic membrane exocytosis 2 		ENST00000262231 (RIMS2-004) 103819260-104251859 protein_coding
ENST00000339750 (RIMS2-201) 104223335-104254425 protein_coding
ENST00000395361 (RIMS2-012) 103766227-103768501 processed_transcript
ENST00000406091 (RIMS2-202) 103880417-104251859 protein_coding
ENST00000408894 (RIMS2-006) 103819387-104251070 protein_coding
ENST00000436393 (RIMS2-007) 103880417-104251859 protein_coding
ENST00000501515 (RIMS2-011) 103915513-103920998 processed_transcript
ENST00000504942 (RIMS2-001) 103500748-104014615 protein_coding
ENST00000507677 (RIMS2-008) 103912132-103976259 retained_intron
ENST00000507740 (RIMS2-005) 103819272-104256094 protein_coding
ENST00000511046 (RIMS2-009) 103915513-103922008 retained_intron
ENST00000512598 (RIMS2-010) 103915513-103918653 retained_intron
ENST00000515551 (RIMS2-003) 103819220-103942846 protein_coding
ENST00000522174 (RIMS2-016) 103819554-103885808 processed_transcript
ENST00000523362 (RIMS2-013) 104223364-104251736 protein_coding
ENSG00000216113 (AP001572.1)
 ENST00000401294 (AP001572.1-201) 103851599-103851688 miRNA
ENSG00000239344 (RP11-771F20.1)
 ENST00000481577 (RP11-771F20.1-001) 103768281-103769029 processed_pseudogene
ENSG00000253477 (RP11-1C8.4)
 ENST00000517376 (RP11-1C8.4-001) 103483398-103499220 antisense
ENST00000523422 (RP11-1C8.4-002) 103483423-103501676 antisense
ENSG00000255105 (RP11-5A11.1)
 ENST00000534173 (RP11-5A11.1-001) 103559099-103559389 processed_pseudogene
ENSG00000261670 (RP11-1C8.5)
 ENST00000562917 (RP11-1C8.5-001) 103464389-103468985 lincRNA
ENSG00000271830 (RP11-1C8.7)
 ENST00000606457 (RP11-1C8.7-001) 103481266-103481619 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00060F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022300-ENSMUSG00000037386 CGP 10090 15:39112865-39681940
GeneTranscriptPositionBiotype
ENSMUSG00000022300 (Dcaf13)
DDB1 and CUL4 associated factor 13 		ENSMUST00000022909 (Dcaf13-001) 39112865-39146856 protein_coding
ENSMUSG00000037386 (Rims2)
regulating synaptic membrane exocytosis 2 		ENSMUST00000042917 (Rims2-201) 39198363-39681764 protein_coding
ENSMUST00000082054 (Rims2-202) 39198332-39681940 protein_coding
ENSMUSG00000084562 (n-R5s39)
nuclear encoded rRNA 5S 39 		ENSMUST00000122613 (n-R5s39-201) 39146380-39146487 rRNA
ENSMUSG00000098021 (Gm9522)
predicted gene 9522 		ENSMUST00000182394 (Gm9522-001) 39180511-39181441 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060F_0001ENSG00000164933ENST00000297578ENST00000521645ENST00000523256ENST00000523701ENST00000523866ENSG00000176406ENST00000262231ENST00000339750ENST00000395361ENST00000406091ENST00000408894ENST00000436393ENST00000501515ENST00000504942ENST00000507677ENST00000507740ENST00000511046ENST00000512598ENST00000515551ENST00000522174ENST00000523362ENSG00000216113ENST00000401294ENSG00000239344ENST00000481577ENSG00000253477ENST00000517376ENST00000523422ENSG00000255105ENST00000534173ENSG00000261670ENST00000562917ENSG00000271830ENST00000606457CIL_00060F_0002ENSMUSG00000022300ENSMUST00000022909ENSMUSG00000037386ENSMUST00000042917ENSMUST00000082054ENSMUSG00000084562ENSMUST00000122613ENSMUSG00000098021ENSMUST00000182394
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060F_0001ENSG00000164933ENST00000297578ENST00000521645ENST00000523701ENST00000523866ENSG00000176406ENST00000262231ENST00000339750ENST00000395361ENST00000408894ENST00000436393ENST00000501515ENST00000504942ENST00000507677ENST00000507740ENST00000515551ENST00000522174ENST00000523362ENSG00000216113ENST00000401294ENSG00000239344ENST00000481577ENSG00000253477ENST00000517376ENST00000523422ENSG00000255105ENST00000534173ENSG00000261670ENST00000562917ENSG00000271830ENST00000606457CIL_00060F_0002ENSMUSG00000022300ENSMUST00000022909ENSMUSG00000037386ENSMUST00000042917ENSMUST00000082054ENSMUSG00000084562ENSMUST00000122613ENSMUSG00000098021ENSMUST00000182394
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164933 ENST00000297578 6.251±0.00 5.693±0.00 N/A 3.675±1.45 5.112±0.00 2.900±0.39 3.540±0.00 5.973±0.00 4.746±0.29 3.823±0.91 2.580±1.02 7.594±0.18 3.321±0.66 7.312±0.31
ENST00000521645 N/A N/A 1.642±0.00 N/A N/A N/A 1.050±0.00 2.595±0.00 N/A N/A N/A N/A N/A N/A
ENST00000523256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523701 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.093±0.00 N/A N/A N/A N/A
ENST00000523866 8.293±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176406 ENST00000262231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.444±0.22
ENST00000339750 0.028±0.00 0.017±0.00 N/A 3.791±0.00 0.015±0.00 0.159±0.00 N/A 0.068±0.00 0.010±0.00 0.019±0.00 N/A 0.562±0.49 0.057±0.01 0.873±0.00
ENST00000395361 N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000406091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000408894 N/A N/A N/A 5.593±0.00 N/A N/A N/A 0.053±0.00 0.207±0.00 N/A N/A N/A N/A N/A
ENST00000436393 N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.680±0.29
ENST00000501515 N/A 0.352±0.00 0.429±0.00 N/A 0.085±0.00 N/A N/A N/A 0.187±0.00 0.080±0.00 N/A 1.091±0.97 0.123±0.00 N/A
ENST00000504942 N/A N/A 0.059±0.00 5.918±0.00 N/A 0.079±0.00 0.018±0.01 0.085±0.00 N/A N/A N/A 0.209±0.00 N/A 0.334±0.00
ENST00000507677 N/A N/A N/A N/A 0.258±0.00 N/A 0.028±0.00 N/A 0.247±0.13 N/A N/A N/A N/A N/A
ENST00000507740 N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A 0.103±0.00 N/A N/A
ENST00000511046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515551 N/A N/A N/A 7.364±0.00 N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A
ENST00000522174 N/A N/A 0.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A
ENST00000523362 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A N/A N/A
ENSG00000216113 ENST00000401294 N/A N/A N/A 0.464±0.00 N/A 0.212±0.00 N/A 0.440±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000239344 ENST00000481577 0.113±0.00 0.146±0.00 N/A N/A 0.226±0.00 0.371±0.00 0.032±0.00 0.265±0.00 N/A 0.082±0.00 0.172±0.00 N/A N/A N/A
ENSG00000253477 ENST00000517376 0.047±0.00 0.243±0.00 N/A 0.220±0.18 0.149±0.00 0.366±0.00 0.044±0.00 0.148±0.00 0.809±0.00 0.022±0.00 N/A 0.058±0.00 0.043±0.00 0.734±0.43
ENST00000523422 N/A N/A N/A 0.733±0.00 N/A N/A N/A N/A N/A N/A 0.108±0.00 0.148±0.00 N/A N/A
ENSG00000255105 ENST00000534173 N/A N/A N/A N/A N/A N/A N/A N/A 0.464±0.00 N/A N/A N/A N/A 0.140±0.00
ENSG00000261670 ENST00000562917 0.074±0.00 0.174±0.00 0.125±0.00 0.114±0.01 0.117±0.00 0.085±0.00 0.059±0.00 0.047±0.03 0.066±0.00 0.066±0.01 0.033±0.00 0.032±0.03 0.074±0.00 0.122±0.01
ENSG00000271830 ENST00000606457 N/A N/A N/A 1.433±1.12 N/A N/A N/A N/A N/A N/A N/A 0.182±0.00 N/A 1.561±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022300 ENSMUST00000022909 3.384±0.29 1.267±0.32 13.332±0.13 14.147±0.72 2.061±0.69 2.780±0.51 2.260±0.59 3.555±1.71 8.857±6.77 3.260±1.46 5.434±0.43 7.258±8.44 21.309±7.55 4.235±3.20
ENSMUSG00000037386 ENSMUST00000042917 N/A 0.387±0.02 N/A 12.220±8.31 0.105±0.00 N/A 0.024±0.01 N/A 0.030±0.01 0.057±0.00 0.004±0.00 0.144±0.01 0.067±0.05 0.692±0.00
ENSMUST00000082054 0.128±0.00 0.620±0.16 N/A 7.714±6.17 0.044±0.00 0.149±0.04 0.043±0.00 0.084±0.05 0.039±0.03 0.078±0.01 0.007±0.00 0.381±0.15 0.065±0.02 0.779±0.14
ENSMUSG00000084562 ENSMUST00000122613 N/A N/A 89.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.393±0.00 N/A
ENSMUSG00000098021 ENSMUST00000182394 1.355±0.94 0.550±0.38 0.440±0.13 0.253±0.20 0.063±0.03 0.376±0.18 0.168±0.02 0.050±0.03 1.553±1.22 0.921±0.80 1.305±0.71 0.860±0.59 0.733±0.47 0.170±0.11

Loading