C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: V-set and immunoglobulin domain containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176834 VSIG10 9606 - 12:118063593-118136026 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321694 VSIG10-012 118114350-118121117 processed_transcript
  ENST00000359236 VSIG10-001 118063593-118103948 protein_coding
  ENST00000536905 VSIG10-006 118082278-118104000 processed_transcript
  ENST00000538357 VSIG10-005 118079399-118103904 protein_coding
  ENST00000539956 VSIG10-011 118117667-118136026 processed_transcript
  ENST00000540117 VSIG10-009 118101900-118103056 retained_intron
  ENST00000541855 VSIG10-007 118095546-118103862 processed_transcript
  ENST00000542011 VSIG10-010 118095622-118135948 processed_transcript
  ENST00000542195 VSIG10-008 118102839-118103990 retained_intron
  ENST00000545259 VSIG10-003 118070953-118073741 retained_intron
  ENST00000545722 VSIG10-004 118079454-118082278 processed_transcript
  ENST00000612851 VSIG10-014 118101605-118103885 retained_intron
  ENST00000621133 VSIG10-015 118117046-118117463 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359236ENST00000621133
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359236 4.065±0.00 N/A N/A N/A 1.321±0.00 N/A N/A N/A 1.594±0.00 1.217±0.00 1.823±0.00 3.154±0.00 6.409±0.00 N/A
ENST00000621133 0.572±0.00 0.362±0.00 0.257±0.00 1.168±0.04 1.399±0.00 0.550±0.36 0.610±0.09 1.182±0.00 2.204±0.87 0.217±0.00 0.113±0.00 2.778±1.09 0.357±0.14 0.419±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QD CIL_0001QD_0002 CGP 12:118032694-118136026

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058605 vsig10 V-set and immunoglobulin domain containing 10 protein_coding Danio_rerio
ENSMUSG00000066894 Vsig10 V-set and immunoglobulin domain containing 10 protein_coding Mus_musculus

Loading