C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: V-set and immunoglobulin domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359236 VSIG10-001 ENSG00000176834 9606 - 12:118063593-118103948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLiverLungMuscleOvaryPlacentaENST00000359236
Transcript ID Adipose Breast Liver Lung Muscle Ovary Placenta
ENST00000359236 4.065±0.00 1.321±0.00 1.594±0.00 1.217±0.00 1.823±0.00 3.154±0.00 6.409±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QD CIL_0001QD_0002 CGP 12:118032694-118136026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086464 Vsig10-001 protein_coding Mus_musculus 0 808
ENSMUST00000111967 Vsig10-005 protein_coding Mus_musculus 0 778
ENSMUST00000147182 Vsig10-002 protein_coding Mus_musculus 0 652
ENSMUST00000145052 Vsig10-003 retained_intron Mus_musculus 0 361

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