C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAF1 transcription factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177030 DEAF1 9606 - 11:644233-706715 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000382409 DEAF1-001 644233-695532 protein_coding
  ENST00000524786 DEAF1-005 687912-692350 processed_transcript
  ENST00000525626 DEAF1-007 686932-706715 processed_transcript
  ENST00000525904 DEAF1-013 653941-681045 processed_transcript
  ENST00000526790 DEAF1-010 674372-678779 retained_intron
  ENST00000526857 DEAF1-008 697486-706624 processed_transcript
  ENST00000527170 DEAF1-002 644233-687936 nonsense_mediated_decay
  ENST00000527658 DEAF1-011 644234-646596 processed_transcript
  ENST00000528864 DEAF1-004 686972-693644 processed_transcript
  ENST00000529717 DEAF1-003 686921-694931 nonsense_mediated_decay
  ENST00000529727 DEAF1-006 689663-691597 processed_transcript
  ENST00000530813 DEAF1-009 653962-684971 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000382409ENST00000527170ENST00000529717
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000382409 7.056±0.00 34.646±22.40 4.439±2.20 9.976±0.00 5.849±0.00 21.511±0.00 1.521±0.00 19.812±0.00 5.450±2.89 15.657±12.07 13.696±0.59
ENST00000527170 N/A N/A N/A N/A N/A N/A 1.280±0.00 N/A N/A N/A N/A
ENST00000529717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.326±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OP CIL_0003OP_0001 CGP 11:637293-706715

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001662 IEA behavioral fear response
GO:0001843 ISS neural tube closure
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007281 TAS germ cell development
GO:0008542 IEA visual learning
GO:0009653 TAS anatomical structure morphogenesis
GO:0033599 IDA regulation of mammary gland epithelial cell proliferation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048706 ISS embryonic skeletal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088844 DEAF1 DEAF1 transcription factor protein_coding Danio_rerio
ENSMUSG00000058886 Deaf1 deformed epidermal autoregulatory factor 1 (Drosophila) protein_coding Mus_musculus

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