C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAF1 transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382409 DEAF1-001 ENSG00000177030 9606 - 11:644233-695532 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000382409
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000382409 7.056±0.00 34.646±22.40 4.439±2.20 9.976±0.00 5.849±0.00 21.511±0.00 1.521±0.00 19.812±0.00 5.450±2.89 15.657±12.07 13.696±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OP CIL_0003OP_0001 CGP 11:637293-706715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001662 IEA behavioral fear response
GO:0001843 ISS neural tube closure
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007281 TAS germ cell development
GO:0008542 IEA visual learning
GO:0009653 TAS anatomical structure morphogenesis
GO:0033599 IDA regulation of mammary gland epithelial cell proliferation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048706 ISS embryonic skeletal system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080553 Deaf1-201 protein_coding Mus_musculus 0 1908

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