C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SIX homeobox 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177045 SIX5 9606 - 19:45764785-45769226 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317578 SIX5-001 45764785-45769226 protein_coding
  ENST00000560160 SIX5-003 45764889-45768627 protein_coding
  ENST00000560168 SIX5-004 45765393-45768855 protein_coding
  ENST00000622857 SIX5-201 45764786-45769053 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastLiverOvaryPlacentaENST00000317578ENST00000560160ENST00000622857
Transcript ID Adipose Bladder Breast Liver Ovary Placenta
ENST00000317578 N/A 0.918±0.00 N/A 2.945±0.00 50.160±0.00 11.491±0.00
ENST00000560160 30.413±0.00 N/A 23.291±0.00 N/A 61.330±0.00 N/A
ENST00000622857 N/A N/A N/A 4.857±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002088 IEA lens development in camera-type eye
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007286 IEA spermatid development
GO:0008285 IEA negative regulation of cell proliferation
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:1902723 IEA negative regulation of skeletal muscle satellite cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068406 six4.3 sine oculis homeobox homolog 4.3 protein_coding Danio_rerio
ENSMUSG00000040841 Six5 sine oculis-related homeobox 5 protein_coding Mus_musculus

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