C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5'-nucleotidase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178425 NT5DC1 9606 + 6:116100849-116249497 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319550 NT5DC1-002 116100849-116249497 protein_coding
  ENST00000417846 NT5DC1-004 116110852-116118092 retained_intron
  ENST00000419791 NT5DC1-003 116100851-116145495 protein_coding
  ENST00000460749 NT5DC1-001 116117919-116239123 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319550ENST00000417846ENST00000419791ENST00000460749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319550 1.624±0.00 2.457±0.00 1.151±0.00 2.150±0.88 1.423±0.65 0.765±0.54 1.776±1.06 2.229±0.42 1.312±0.00 1.244±0.00 1.158±0.68 1.861±0.57 0.949±0.22 2.131±0.49
ENST00000417846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.763±0.00 N/A N/A N/A
ENST00000419791 N/A N/A N/A N/A N/A 5.169±0.00 9.566±0.00 5.132±0.00 N/A N/A 2.408±0.00 N/A 3.816±0.10 4.855±0.00
ENST00000460749 5.992±0.00 7.974±0.00 N/A 8.307±0.00 6.939±0.00 5.250±0.00 8.038±0.00 6.197±2.98 4.766±0.00 4.034±0.00 7.800±0.00 14.166±5.62 4.727±3.06 8.895±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EJ CIL_0001EJ_0002 CGP 6:115931149-116249497

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006797 nt5dc1 5'-nucleotidase domain containing 1 protein_coding Danio_rerio
ENSMUSG00000039480 Nt5dc1 5'-nucleotidase domain containing 1 protein_coding Mus_musculus

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