C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001EJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000027807-ENSDARG00000006797 CGP 7955 20:460751-547541
GeneTranscriptPositionBiotype
ENSDARG00000006797 (nt5dc1)
5'-nucleotidase domain containing 1 		ENSDART00000026794 (nt5dc1-201) 490788-547539 protein_coding
ENSDART00000138585 (nt5dc1-001) 539335-547541 protein_coding
ENSDARG00000027807 (fynrk)
fyn-related kinase 		ENSDART00000032212 (fynrk-201) 460751-504156 protein_coding
ENSDART00000149973 (fynrk-001) 462712-477768 protein_coding
CIL_0001EJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111816-ENSG00000178425 CGP 9606 6:115931149-116249497
GeneTranscriptPositionBiotype
ENSG00000111816 (FRK)
fyn-related Src family tyrosine kinase 		ENST00000606080 (FRK-001) 115931149-116060758 protein_coding
ENSG00000123500 (COL10A1)
collagen, type X, alpha 1 		ENST00000243222 (COL10A1-201) 116118923-116126133 protein_coding
ENST00000327673 (COL10A1-001) 116119026-116125900 protein_coding
ENST00000418500 (COL10A1-002) 116125339-116158747 protein_coding
ENST00000452729 (COL10A1-003) 116121467-116126120 protein_coding
ENSG00000178425 (NT5DC1)
5'-nucleotidase domain containing 1 		ENST00000319550 (NT5DC1-002) 116100849-116249497 protein_coding
ENST00000417846 (NT5DC1-004) 116110852-116118092 retained_intron
ENST00000419791 (NT5DC1-003) 116100851-116145495 protein_coding
ENST00000460749 (NT5DC1-001) 116117919-116239123 nonsense_mediated_decay
ENSG00000186743 (TPI1P3)
triosephosphate isomerase 1 pseudogene 3 		ENST00000335020 (TPI1P3-001) 116038756-116039495 processed_pseudogene
ENSG00000218428 (NIP7P3)
NIP7, nucleolar pre-rRNA processing protein pseudogene 3 		ENST00000404319 (NIP7P3-001) 116137058-116137572 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EJ_0001ENSDARG00000006797ENSDART00000026794ENSDART00000138585ENSDARG00000027807ENSDART00000032212ENSDART00000149973CIL_0001EJ_0002ENSG00000111816ENST00000606080ENSG00000123500ENST00000243222ENST00000327673ENST00000418500ENST00000452729ENSG00000178425ENST00000319550ENST00000417846ENST00000419791ENST00000460749ENSG00000186743ENST00000335020ENSG00000218428ENST00000404319
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EJ_0001ENSDARG00000006797ENSDART00000026794ENSDARG00000027807ENSDART00000032212ENSDART00000149973CIL_0001EJ_0002ENSG00000111816ENST00000606080ENSG00000123500ENST00000243222ENST00000327673ENST00000418500ENST00000452729ENSG00000178425ENST00000319550ENST00000417846ENST00000419791ENST00000460749ENSG00000186743ENST00000335020ENSG00000218428ENST00000404319
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006797 ENSDART00000026794 N/A N/A N/A 12.116±8.83 N/A N/A 0.535±0.00 0.491±0.00 0.628±0.00 N/A 1.300±0.00 N/A N/A N/A
ENSDART00000138585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000027807 ENSDART00000032212 N/A N/A N/A 3.377±0.20 N/A N/A 0.729±0.38 1.737±0.24 0.125±0.00 N/A N/A N/A N/A N/A
ENSDART00000149973 N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111816 ENST00000606080 0.285±0.00 0.778±0.00 4.997±0.00 0.460±0.20 0.936±0.02 1.843±1.37 1.068±0.27 4.431±0.13 1.430±0.29 1.066±0.40 0.494±0.24 1.634±1.29 1.504±1.98 0.825±0.53
ENSG00000123500 ENST00000243222 0.019±0.00 N/A N/A 0.215±0.00 0.013±0.00 N/A N/A 0.246±0.00 0.027±0.00 0.308±0.00 N/A 0.673±0.00 N/A 0.034±0.01
ENST00000327673 N/A 0.053±0.00 0.330±0.00 0.260±0.23 0.435±0.00 0.209±0.00 0.058±0.00 N/A 0.528±0.00 0.476±0.00 N/A N/A 0.045±0.00 0.042±0.00
ENST00000418500 N/A N/A N/A 2.231±0.00 N/A N/A N/A N/A N/A 6.500±0.00 N/A 2.817±0.00 N/A 0.159±0.00
ENST00000452729 0.078±0.00 N/A N/A N/A 0.864±0.74 N/A N/A 1.030±0.00 N/A 0.311±0.00 N/A N/A N/A 0.104±0.00
ENSG00000178425 ENST00000319550 1.624±0.00 2.457±0.00 1.151±0.00 2.150±0.88 1.423±0.65 0.765±0.54 1.776±1.06 2.229±0.42 1.312±0.00 1.244±0.00 1.158±0.68 1.861±0.57 0.949±0.22 2.131±0.49
ENST00000417846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.763±0.00 N/A N/A N/A
ENST00000419791 N/A N/A N/A N/A N/A 5.169±0.00 9.566±0.00 5.132±0.00 N/A N/A 2.408±0.00 N/A 3.816±0.10 4.855±0.00
ENST00000460749 5.992±0.00 7.974±0.00 N/A 8.307±0.00 6.939±0.00 5.250±0.00 8.038±0.00 6.197±2.98 4.766±0.00 4.034±0.00 7.800±0.00 14.166±5.62 4.727±3.06 8.895±0.23
ENSG00000186743 ENST00000335020 N/A N/A 0.712±0.00 N/A 0.209±0.04 N/A 0.116±0.00 0.060±0.00 0.027±0.00 0.060±0.00 0.101±0.00 N/A N/A 1.785±0.35
ENSG00000218428 ENST00000404319 N/A 0.084±0.00 0.424±0.00 0.058±0.00 0.979±0.00 0.413±0.18 0.068±0.00 0.501±0.00 0.395±0.00 2.174±0.00 N/A 0.390±0.47 N/A N/A

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