C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycine dehydrogenase (decarboxylating)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178445 GLDC 9606 - 9:6532464-6645650 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321612 GLDC-001 6532464-6645650 protein_coding
  ENST00000460457 GLDC-005 6557948-6565418 processed_transcript
  ENST00000463305 GLDC-002 6589207-6605272 processed_transcript
  ENST00000467946 GLDC-004 6553432-6554909 processed_transcript
  ENST00000477960 GLDC-003 6532899-6540179 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321612ENST00000460457ENST00000463305ENST00000477960
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321612 0.010±0.00 0.295±0.00 6.557±0.00 2.036±0.38 0.065±0.00 0.051±0.00 0.024±0.00 18.247±0.78 7.115±6.99 0.074±0.05 N/A 2.548±1.98 23.726±5.09 1.173±0.81
ENST00000460457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A
ENST00000463305 N/A N/A N/A N/A 0.209±0.00 0.433±0.00 0.020±0.00 N/A N/A N/A 0.127±0.00 N/A N/A N/A
ENST00000477960 0.092±0.00 0.824±0.00 N/A N/A N/A N/A 0.146±0.00 N/A N/A N/A N/A 7.649±0.00 N/A 1.128±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D8 CIL_0001D8_0001 CGP 9:6413151-6645650

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004375 IEA glycine dehydrogenase (decarboxylating) activity
GO:0005739 IEA mitochondrion
GO:0006520 IEA cellular amino acid metabolic process
GO:0006544 IEA glycine metabolic process
GO:0006546 IEA glycine catabolic process
GO:0009055 TAS electron carrier activity
GO:0016829 IEA lyase activity
GO:0030170 IEA pyridoxal phosphate binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035120 GLDC glycine dehydrogenase (decarboxylating) protein_coding Danio_rerio
ENSMUSG00000024827 Gldc glycine decarboxylase protein_coding Mus_musculus

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