C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001D8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147854-ENSG00000178445 CGP 9606 9:6413151-6645650
GeneTranscriptPositionBiotype
ENSG00000147854 (UHRF2)
ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase 		ENST00000276893 (UHRF2-003) 6413323-6507054 protein_coding
ENST00000381373 (UHRF2-002) 6413418-6422979 protein_coding
ENST00000450508 (UHRF2-004) 6421031-6477654 protein_coding
ENST00000461236 (UHRF2-013) 6414058-6434025 processed_transcript
ENST00000468435 (UHRF2-001) 6413151-6507054 nonsense_mediated_decay
ENST00000469298 (UHRF2-011) 6413193-6434348 processed_transcript
ENST00000477183 (UHRF2-007) 6482051-6492844 processed_transcript
ENST00000479000 (UHRF2-008) 6497049-6498150 processed_transcript
ENST00000481049 (UHRF2-012) 6413777-6460581 processed_transcript
ENST00000481243 (UHRF2-009) 6504350-6506112 processed_transcript
ENST00000484159 (UHRF2-010) 6434088-6495998 retained_intron
ENST00000485617 (UHRF2-005) 6486871-6507054 processed_transcript
ENST00000492853 (UHRF2-006) 6498352-6507054 processed_transcript
ENSG00000178445 (GLDC)
glycine dehydrogenase (decarboxylating) 		ENST00000321612 (GLDC-001) 6532464-6645650 protein_coding
ENST00000460457 (GLDC-005) 6557948-6565418 processed_transcript
ENST00000463305 (GLDC-002) 6589207-6605272 processed_transcript
ENST00000467946 (GLDC-004) 6553432-6554909 processed_transcript
ENST00000477960 (GLDC-003) 6532899-6540179 processed_transcript
ENSG00000206147 (RP11-106A1.2)
 ENST00000332361 (RP11-106A1.2-001) 6639139-6639604 processed_pseudogene
ENSG00000233367 (RP11-307L3.4)
 ENST00000411561 (RP11-307L3.4-001) 6415145-6449558 antisense
ENSG00000237158 (RP11-472F14.4)
 ENST00000451028 (RP11-472F14.4-001) 6568844-6569360 processed_pseudogene
ENSG00000264530 (RN7SL25P)
RNA, 7SL, cytoplasmic 25, pseudogene 		ENST00000583862 (RN7SL25P-201) 6542094-6542353 misc_RNA
CIL_0001D8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024817-ENSMUSG00000024827 CGP 10090 19:30030513-30175418
GeneTranscriptPositionBiotype
ENSMUSG00000024817 (Uhrf2)
ubiquitin-like, containing PHD and RING finger domains 2 		ENSMUST00000025739 (Uhrf2-001) 30030513-30093722 protein_coding
ENSMUST00000112552 (Uhrf2-004) 30030589-30057163 protein_coding
ENSMUST00000123773 (Uhrf2-005) 30089056-30093722 retained_intron
ENSMUST00000127244 (Uhrf2-006) 30085694-30087316 retained_intron
ENSMUST00000129420 (Uhrf2-007) 30073783-30075521 retained_intron
ENSMUST00000134518 (Uhrf2-003) 30030513-30058812 retained_intron
ENSMUST00000137368 (Uhrf2-002) 30030513-30081519 retained_intron
ENSMUST00000143769 (Uhrf2-009) 30091961-30092939 retained_intron
ENSMUST00000150532 (Uhrf2-008) 30078504-30080245 retained_intron
ENSMUSG00000024827 (Gldc)
glycine decarboxylase 		ENSMUST00000025778 (Gldc-201) 30098449-30175418 protein_coding
ENSMUSG00000058607 (Rpl31-ps20)
ribosomal protein L31, pseudogene 20 		ENSMUST00000080982 (Rpl31-ps20-001) 30160620-30160997 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001D8_0001ENSG00000147854ENST00000276893ENST00000381373ENST00000450508ENST00000461236ENST00000468435ENST00000469298ENST00000477183ENST00000479000ENST00000481049ENST00000481243ENST00000484159ENST00000485617ENST00000492853ENSG00000178445ENST00000321612ENST00000460457ENST00000463305ENST00000467946ENST00000477960ENSG00000206147ENST00000332361ENSG00000233367ENST00000411561ENSG00000237158ENST00000451028ENSG00000264530ENST00000583862CIL_0001D8_0002ENSMUSG00000024817ENSMUST00000025739ENSMUST00000112552ENSMUST00000123773ENSMUST00000127244ENSMUST00000129420ENSMUST00000134518ENSMUST00000137368ENSMUST00000143769ENSMUST00000150532ENSMUSG00000024827ENSMUST00000025778ENSMUSG00000058607ENSMUST00000080982
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001D8_0001ENSG00000147854ENST00000276893ENST00000450508ENST00000468435ENST00000484159ENST00000485617ENST00000492853ENSG00000178445ENST00000321612ENST00000460457ENST00000463305ENST00000477960ENSG00000206147ENST00000332361ENSG00000233367ENST00000411561ENSG00000237158ENST00000451028ENSG00000264530ENST00000583862CIL_0001D8_0002ENSMUSG00000024817ENSMUST00000025739ENSMUST00000123773ENSMUST00000134518ENSMUST00000143769ENSMUSG00000024827ENSMUST00000025778ENSMUSG00000058607ENSMUST00000080982
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147854 ENST00000276893 2.964±0.00 3.229±0.00 1.746±0.00 1.804±0.90 3.079±0.46 5.264±4.02 1.299±1.01 5.637±0.00 2.190±0.95 4.059±1.40 2.568±1.98 4.670±1.10 3.829±0.98 7.449±0.00
ENST00000381373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450508 N/A N/A 8.354±0.00 N/A N/A N/A N/A N/A N/A N/A 3.029±0.00 N/A N/A N/A
ENST00000461236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468435 N/A N/A N/A 1.164±0.00 N/A N/A N/A N/A N/A N/A N/A 1.939±0.00 0.611±0.00 3.910±1.82
ENST00000469298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484159 N/A 1.393±0.00 1.025±0.00 0.904±0.00 2.949±0.00 N/A 0.350±0.01 1.098±0.00 N/A 2.678±0.00 0.287±0.00 1.338±0.00 N/A N/A
ENST00000485617 N/A N/A N/A 0.826±0.00 0.604±0.00 N/A 0.362±0.00 1.266±0.00 N/A N/A 0.603±0.00 1.663±0.38 N/A N/A
ENST00000492853 N/A 2.312±0.00 N/A 0.947±0.00 N/A N/A N/A 1.427±0.00 0.390±0.00 N/A N/A 2.209±0.00 N/A N/A
ENSG00000178445 ENST00000321612 0.010±0.00 0.295±0.00 6.557±0.00 2.036±0.38 0.065±0.00 0.051±0.00 0.024±0.00 18.247±0.78 7.115±6.99 0.074±0.05 N/A 2.548±1.98 23.726±5.09 1.173±0.81
ENST00000460457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A
ENST00000463305 N/A N/A N/A N/A 0.209±0.00 0.433±0.00 0.020±0.00 N/A N/A N/A 0.127±0.00 N/A N/A N/A
ENST00000467946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477960 0.092±0.00 0.824±0.00 N/A N/A N/A N/A 0.146±0.00 N/A N/A N/A N/A 7.649±0.00 N/A 1.128±0.00
ENSG00000206147 ENST00000332361 0.351±0.00 0.418±0.00 N/A N/A 0.391±0.00 0.505±0.00 0.239±0.00 0.349±0.00 0.139±0.00 N/A N/A N/A N/A 0.333±0.00
ENSG00000233367 ENST00000411561 N/A 0.217±0.00 N/A 0.228±0.00 N/A N/A 0.034±0.01 N/A N/A 0.533±0.00 N/A 0.514±0.00 N/A 0.037±0.00
ENSG00000237158 ENST00000451028 N/A N/A N/A N/A N/A N/A N/A 0.258±0.02 N/A N/A N/A 0.596±0.00 N/A 0.125±0.04
ENSG00000264530 ENST00000583862 0.150±0.00 0.244±0.00 N/A 0.269±0.00 0.257±0.00 N/A 0.455±0.00 0.681±0.00 N/A 0.083±0.00 N/A 0.742±0.00 N/A 0.095±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024817 ENSMUST00000025739 6.640±3.38 3.787±0.63 8.869±0.40 15.556±8.25 5.240±2.30 9.034±2.03 2.866±0.38 5.010±0.45 9.690±6.20 5.292±0.92 2.203±0.54 7.908±1.76 12.657±1.89 2.706±0.43
ENSMUST00000112552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123773 7.768±3.45 N/A 10.369±0.57 18.521±11.21 9.824±0.00 N/A 2.284±0.00 5.219±0.57 10.232±6.59 4.808±0.56 1.114±0.00 N/A 8.006±1.38 2.990±0.87
ENSMUST00000127244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134518 N/A 5.084±1.10 N/A N/A N/A 9.239±0.00 N/A N/A N/A N/A N/A 8.787±3.95 N/A N/A
ENSMUST00000137368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143769 N/A N/A N/A N/A 17.840±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000024827 ENSMUST00000025778 0.306±0.07 0.443±0.06 16.701±0.02 5.284±1.47 0.614±0.11 0.111±0.04 0.081±0.03 32.361±4.68 40.898±20.29 0.085±0.03 0.018±0.01 0.361±0.15 7.754±7.77 1.251±0.68
ENSMUSG00000058607 ENSMUST00000080982 N/A N/A 0.235±0.12 0.052±0.00 0.486±0.00 N/A N/A 0.276±0.06 0.169±0.12 N/A N/A 0.272±0.00 0.021±0.00 0.157±0.00

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