C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178537 SLC25A20 9606 - 3:48856931-48898993 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319017 SLC25A20-001 48856936-48898993 protein_coding
  ENST00000430379 SLC25A20-002 48856931-48898904 protein_coding
  ENST00000440964 SLC25A20-003 48857392-48898892 nonsense_mediated_decay
  ENST00000479050 SLC25A20-004 48857241-48858668 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319017ENST00000430379ENST00000440964ENST00000479050
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319017 9.521±0.00 6.575±0.00 0.416±0.00 1.820±0.72 9.174±8.40 3.780±2.11 16.926±14.41 13.341±6.48 17.157±16.55 1.310±0.76 7.402±2.21 4.860±3.15 5.760±0.49 6.330±0.29
ENST00000430379 N/A N/A 0.805±0.00 N/A N/A N/A N/A N/A 0.279±0.00 N/A N/A N/A N/A N/A
ENST00000440964 N/A N/A N/A N/A 0.609±0.00 N/A 0.427±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000479050 5.338±0.00 5.059±0.00 0.954±0.00 2.799±0.00 10.211±0.00 1.784±0.05 N/A N/A 5.544±3.97 2.844±0.00 3.737±0.00 0.330±0.00 N/A 4.707±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FN CIL_0003FN_0002 CGP 3:48744597-48898993

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006810 IEA transport
GO:0006853 TAS carnitine shuttle
GO:0016021 IEA integral component of membrane
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040401 slc25a20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 protein_coding Danio_rerio
ENSMUSG00000032602 Slc25a20 solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20 protein_coding Mus_musculus

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