C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003FN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009477-ENSDARG00000040401 CGP 7955 22:182815-208170
GeneTranscriptPositionBiotype
ENSDARG00000009477 (prkar2ab)
protein kinase, cAMP-dependent, regulatory, type II, alpha, B 		ENSDART00000143698 (prkar2ab-001) 182815-203359 protein_coding
ENSDARG00000040401 (slc25a20)
solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 		ENSDART00000059140 (slc25a20-001) 203830-208170 protein_coding
ENSDART00000146978 (slc25a20-002) 204832-208132 nonsense_mediated_decay
CIL_0003FN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114302-ENSG00000178537 CGP 9606 3:48744597-48898993
GeneTranscriptPositionBiotype
ENSG00000114302 (PRKAR2A)
protein kinase, cAMP-dependent, regulatory, type II, alpha 		ENST00000265563 (PRKAR2A-001) 48746579-48847846 protein_coding
ENST00000296446 (PRKAR2A-003) 48749648-48847828 protein_coding
ENST00000419216 (PRKAR2A-007) 48790599-48847833 protein_coding
ENST00000437821 (PRKAR2A-005) 48751258-48794013 protein_coding
ENST00000438535 (PRKAR2A-006) 48751339-48765350 protein_coding
ENST00000454963 (PRKAR2A-002) 48747515-48847804 protein_coding
ENST00000457914 (PRKAR2A-004) 48744597-48752318 protein_coding
ENSG00000178537 (SLC25A20)
solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 		ENST00000319017 (SLC25A20-001) 48856936-48898993 protein_coding
ENST00000430379 (SLC25A20-002) 48856931-48898904 protein_coding
ENST00000440964 (SLC25A20-003) 48857392-48898892 nonsense_mediated_decay
ENST00000479050 (SLC25A20-004) 48857241-48858668 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003FN_0001ENSDARG00000009477ENSDART00000143698ENSDARG00000040401ENSDART00000059140ENSDART00000146978CIL_0003FN_0002ENSG00000114302ENST00000265563ENST00000296446ENST00000419216ENST00000437821ENST00000438535ENST00000454963ENST00000457914ENSG00000178537ENST00000319017ENST00000430379ENST00000440964ENST00000479050
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003FN_0001ENSDARG00000009477ENSDART00000143698ENSDARG00000040401ENSDART00000059140CIL_0003FN_0002ENSG00000114302ENST00000265563ENST00000296446ENST00000437821ENST00000438535ENST00000454963ENSG00000178537ENST00000319017ENST00000430379ENST00000440964ENST00000479050
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009477 ENSDART00000143698 N/A N/A N/A 3.862±0.00 N/A N/A 0.598±0.00 0.285±0.00 0.042±0.00 N/A 0.266±0.00 N/A N/A N/A
ENSDARG00000040401 ENSDART00000059140 N/A N/A N/A 8.472±3.79 N/A N/A 22.415±8.75 5.568±2.61 10.009±0.00 N/A 40.659±0.00 N/A N/A N/A
ENSDART00000146978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114302 ENST00000265563 11.014±0.00 5.061±0.00 1.586±0.00 3.585±2.15 7.025±4.01 2.423±0.56 6.790±4.89 3.735±1.12 4.011±0.00 2.334±0.03 15.622±12.32 6.297±3.31 4.975±2.29 7.719±0.17
ENST00000296446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.861±0.00 1.058±0.00 N/A N/A
ENST00000419216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.692±0.00
ENST00000438535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 60.615±0.00
ENST00000454963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.151±0.00 8.982±0.00 24.615±7.67
ENST00000457914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178537 ENST00000319017 9.521±0.00 6.575±0.00 0.416±0.00 1.820±0.72 9.174±8.40 3.780±2.11 16.926±14.41 13.341±6.48 17.157±16.55 1.310±0.76 7.402±2.21 4.860±3.15 5.760±0.49 6.330±0.29
ENST00000430379 N/A N/A 0.805±0.00 N/A N/A N/A N/A N/A 0.279±0.00 N/A N/A N/A N/A N/A
ENST00000440964 N/A N/A N/A N/A 0.609±0.00 N/A 0.427±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000479050 5.338±0.00 5.059±0.00 0.954±0.00 2.799±0.00 10.211±0.00 1.784±0.05 N/A N/A 5.544±3.97 2.844±0.00 3.737±0.00 0.330±0.00 N/A 4.707±0.00

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